Halomonas sp. FeN2: KF947_20315
Help
Entry
KF947_20315 CDS
T10697
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hafn Halomonas sp. FeN2
Pathway
hafn03420
Nucleotide excision repair
hafn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hafn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KF947_20315
03430 Mismatch repair
KF947_20315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hafn03400
]
KF947_20315
Enzymes [BR:
hafn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KF947_20315
DNA repair and recombination proteins [BR:
hafn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KF947_20315
MMR (mismatch excision repair)
Other MMR factors
KF947_20315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
PhoH
ResIII
Motif
Other DBs
NCBI-ProteinID:
UBR49634
LinkDB
All DBs
Position
4434364..4436574
Genome browser
AA seq
736 aa
AA seq
DB search
MKLTAEQQAVVNHQAGHARVAAVAGAGKTTTMAARVLHILASGVPPKRILVLMFNRSAKD
DFQRRLASMAPAGQALPDVRTFHSLGHRLTMSLCRWGALAPRQLLSADWQLERLLRQASL
NVLRDAVERRDAALEGDRLEVLAHFCGLVKAEMVTPEALYERLNFDPDTDYFPAAFAEAE
RLLAAEGVMTYADLLYRPLLALEADSALRGRVEGFLDHVIIDEYQDINAAQQRLLSVLVG
SRAEVMAVGDANQCIYEWRGAKPDTMLENFTATFGEATDYPLSTTFRHGHALALAANHAI
AANQRRPNQLCLAAANNPETRVSVGQGSRLLLDALMDWQAQGRAFNEASLLVRSWALSVP
FQLALLQAGIPFRLQREDRFVFRLPLVQALAGYLKLSRRPDLLRDPQQLLLLLSQPTPFV
ARERLQRLAHQLATTQQWPERHDPMLTALKPIQRRTLKKRWLLLCELPQLSAWPPAKLLR
HVVESIDAEKTLKRAAARRDKGEEDVRLLDVLIEQAQSVQDPDAFIELLERPVENQAGGV
LISTVHGAKGLEWPLVAVAGVNEEDFPHYSRDNPLSDDRLEEERRLFYVAITRAQEQLLV
LHDGGVHRPSRFIAESAWQDSMRVASCLASTNAPAATLQVTSVGLVERYLARLGRDDIVL
APAQVEEVKVGYSAEANFYPGQRLHHAVFGIGEVAAVEGSASDPVIDVRFDQAGRRRLIA
RRAPIELLENGSTLAG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttaaccgctgaacagcaagctgttgttaatcaccaggcggggcatgcacgggta
gcggccgtggccggggccggtaaaaccaccaccatggctgcccgggtgctgcatatattg
gccagtggcgtaccgccaaagcgtatcctggtgctgatgtttaaccgctctgccaaagat
gattttcaacgccgcttagcttcaatggctcctgcaggccaggcgctgccggatgtgcgt
acttttcactccctgggccaccgcttgaccatgagcctgtgccggtggggcgcgctggcg
ccgcgccagctactgtccgccgattggcaactggaaaggctgcttcgccaagcgagcctc
aatgtgctgcgtgacgcggttgagcgccgggatgctgccctggagggagatcgcctggaa
gtattggcccacttctgtggcttggttaaagcagaaatggtcaccccggaagcgctctac
gagcggctcaattttgacccggatactgactattttccggcagcctttgccgaagcagag
aggctgttggcagcggaaggcgtcatgacctatgccgatctgctctatcgtccgctgttg
gctttagaggctgatagcgccctgcgtggtcgggtcgaagggtttctggatcatgtcatt
atcgacgaataccaggatattaacgctgcacagcagcgacttttatcggtgttggtaggt
agtcgtgccgaggtaatggcagtgggtgatgccaaccagtgtatttatgagtggcgcggc
gccaagcccgacaccatgctggaaaattttaccgccacttttggcgaggcgaccgattat
ccgctatcgaccaccttcaggcatggtcatgcgttggcgctggcagctaatcatgccatt
gccgctaatcagcgtcgccccaaccagttgtgcctggccgcagctaataaccctgaaacc
cgtgtttcagtcgggcaggggagccggttactgcttgatgcattgatggattggcaggcc
caggggcgagcgtttaacgaagccagcttgctggtacgcagctgggcgctttcggtaccg
ttccagctggcgctgctccaggctgggataccgtttcggcttcagcgtgaggatcgtttt
gtttttcgtctgccgctggtgcaggcgctggcggggtatttaaagctgtcacgtcgccct
gatcttctgcgcgatccgcagcagctgttactgctgctttctcaaccaacacccttcgtt
gcccgtgagcggcttcagcgtttggcacaccaactggcgactactcagcagtggcccgag
cggcatgaccccatgcttacggcgttaaagccgatccagcggcgcacgctgaaaaagcgc
tggctgctactttgtgagctgccacagctgagcgcatggccacccgctaagttgctacgc
cacgtggtggaaagtattgatgctgaaaaaacgctgaagcgtgcggcagcgcggcgagat
aaaggcgaagaggatgtgcgcttactcgacgtgctaatcgaacaagcgcaaagcgtgcaa
gaccctgatgcctttatcgagcttcttgaacgcccggtggaaaatcaggcgggcggtgtc
ctgattagcactgtacacggcgccaaagggctcgagtggccgctggtagcggttgccggg
gttaacgaagaagactttccccactatagccgcgataatccgctcagcgatgaccggctt
gaggaggagcggcggctcttctacgtggcgatcactcgtgcccaggagcaactattagtg
cttcatgacgggggcgtgcaccggccgagtcgctttattgccgaaagcgcctggcaggat
agcatgcgggttgcctcctgcttagccagtaccaacgcacccgcggcgaccctgcaagtg
acatcagtggggttggttgaacgctatctggcgcgactggggcgagacgatattgtgctt
gcgccggcacaggttgaagaggtcaaagtaggttattcagcagaggcgaatttctaccct
ggtcaacggcttcatcatgcggtatttggcataggcgaagtggcggcagtggagggaagt
gccagtgatccggttattgatgtgcgctttgatcaggcaggacgaagaaggctcattgca
cgccgcgcaccgattgaactgctcgaaaatggctcaacccttgctgggtaa
DBGET
integrated database retrieval system
