Halomonas sp. FeN2: KF947_20505
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Entry
KF947_20505 CDS
T10697
Name
(GenBank) TRAM domain-containing protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hafn Halomonas sp. FeN2
Brite
KEGG Orthology (KO) [BR:
hafn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hafn03009
]
KF947_20505
Enzymes [BR:
hafn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KF947_20505
Ribosome biogenesis [BR:
hafn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KF947_20505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
TRAM
Methyltransf_25
Cons_hypoth95
RrnaAD
Methyltransf_11
MTS
DREV
Methyltransf_23
Methyltransf_31
SAM_MT
Methyltr_RsmB-F
Methyltransf_15
TehB
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
UBR49671
LinkDB
All DBs
Position
4476891..4478288
Genome browser
AA seq
465 aa
AA seq
DB search
MAMLGKRRPPRPASGHSGLARSPGGKAPHTAVEDASPLVIERLAHDGRGVAHSANGKTVF
VDQALPGEQVEVAIHLTRKRFDEAHIKSLLTTSEQRVTPPCPHFGHCGGCDLQHLNVDAQ
RDHKREVVRDLFARQGITLSEIGSIQGDDQGYRRRARLGVKVDSQGNTRLGFRAAHSHRL
VDIERCLVLVDALQRLVTPLRELLNTLEAPRQVGHIELLATATAQVVLVRQLKEHAGDAD
RWQAFSQQQGVALGTWLGRETPTLHWHGAVPALEESLAVDGQPPLSLSFAPGDFLQVNAQ
VNQQMVAQVIQWLAPKPGQKLLDLFAGIGNFSLPIAAAGAEVHAVEGNPAMVARIAINAK
RNQLMVSGQQADLSNAVGVNELLTVHGDSDALVLDPPRSGAEVICQALARHPVPRVVYIS
CDPATLARDAAHLVHAGYRVKQVAVADMFLHTAHMETLMLFEYGD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttgggaaaacggcggccgcccaggcccgcatcaggtcattctgggctggcg
cgctcgccgggcggcaaggctccgcataccgctgtagaggacgcatcgccgctggtcatt
gaacgtttggctcatgatgggcgtggcgtggcccattcggccaacggtaaaacggtcttt
gtcgatcaggcgctgcctggtgaacaggtcgaagtggccattcatctcacccgcaaacgc
tttgacgaagcgcatatcaagtcactgctaaccacatctgagcagcgcgtaacgccgcct
tgcccgcattttggtcactgcggtgggtgtgatctgcagcatttaaacgtcgatgctcag
cgcgatcataagcgcgaggtagtgcgcgacctgtttgcgcgccagggcatcacgttaagc
gagatcggctcaattcagggtgacgaccaaggctaccgtcgtcgtgcgcggctgggggtc
aaagtcgatagccaaggcaatacccgcctgggttttcgtgccgcccatagtcatcgcctg
gtggatattgaacgctgcctggtattggttgatgccttacagcgtctggtaactcctttg
cgtgagctgctgaatacgttagaggcgccgcgccaggtagggcacatcgaattattggca
acagcaaccgcgcaggtcgtgctggttcgtcagttaaaagagcacgctggggacgccgat
cgctggcaagccttttcacagcagcagggagtggcgctaggcacctggttggggcgcgaa
acacccacactgcactggcatggcgcagtgccagcgcttgaagagtcgctagcggtggat
ggtcagccaccgcttagcttaagttttgcaccgggagattttttacaggtcaacgcccag
gttaatcagcaaatggtcgcccaggtcattcagtggctagcgcctaagccagggcaaaaa
ctacttgatctgtttgccggtatcggtaatttcagcctacccatagcggcagcgggtgct
gaggttcatgcggtggaagggaaccccgccatggtggcgcgcattgcgattaacgctaag
cgcaatcagttgatggtcagcggtcagcaggccgatttaagcaacgctgtcggcgttaat
gagctattaactgtacatggtgatagtgatgcgctggtgctcgatccgccgcgtagcggc
gctgaagtcatttgtcaggcgctggcgcgccacccagtgcccagggtggtctatatttcc
tgtgatccggcgacgcttgcccgggatgcggcacaccttgtgcatgcggggtaccgggtc
aagcaagtagcagtggcggatatgttccttcacactgcacatatggaaacgctgatgctg
ttcgagtacggggactag
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