Halomonas sp. GFAJ-1: BB497_00170
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Entry
BB497_00170 CDS
T05375
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hag03036
]
BB497_00170
Chromosome and associated proteins [BR:
hag03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
BB497_00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
BRE1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AVI61230
UniProt:
H0IZG7
LinkDB
All DBs
Position
complement(42344..45835)
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AA seq
1163 aa
AA seq
DB search
MRLTSIRLVGFKSFVDPVTVPFDGNMTAIVGPNGCGKSNIIDAVRWVMGESSAKTLRGES
MADVIFNGSTGRKPIGQASIELKFDNRDGGMGGVYAQYSEIAVKRLVTRDGQSNYFFNGQ
KCRRRDIADLFMGTGLGPRSYAIIGQGMISRLIEARPDDLRATLEEAAGISKYKERRRET
ENRMRRTQENLERLDDIREELDKQLERLKRQAEAAKRYQELKQQEYRLKGELALLRGRTL
RIEQSHQESRVRELEIAVEKDVFGVRQCETRLEQAREQHDELAEVLDRHQQQFYETTTRI
ARLEQDQAHRRSRDAQLASDITTARRDLSEQRRVSEGDQERLATINARFDDLLPEHEALE
EQLEILEQTLADASPALEAAEQQWSDAENHWRDASREADRSQDQLRNLEQRITRLQTESQ
RRRQQQGELADVTVLRSEHAECQEQRDEAEQRSGAFQVERDQWQQRYSDAKAAYQQAVQA
RDQQRAELTQRQGELASLNALIEAALADHDPMLADVLAAHDLTDAPRLGEAISVTQGWER
VISWLLEPWLNARLVATEQLKTLPEALATDWCLIEQTAYSPSLRHRLDSLVTGAGALGEW
LARIHYAETSQDAEALLATLAPGESVVSRDGVWRGRGWLHQQANGEGVDALLVTRRRYDE
LAARREQDEKALALLDAQCDAASDTIEALEHTREQQASEERAHAATLQQLAVQEQRLAQR
LEHLEGRASELNDELAQLQEDEAELTLTLEEQRARWHSAMEQLEAAANAREASVQQRSRQ
REQREQLNQQHAPLKARQQSLALERERLTAERDSLRAQQARSSDSEERLALRIAELEEAR
EMLVEPVELAAEELEELLYQREQQERRLNETRQKAQALAEQLRNDELARQQHERNLEQSR
EQLQQRRMEVQALVLKAATQDEQLAELGHDAETLAEHLPHDASETAWQERLESTTDKIRR
LGAINLAAIEEYDQQAERRNYLEAQHAELTEALETLERAIKRIDQETRVRFRETFEQVNT
GLQTLFPRVFGGGAAWLTLTGDDLLETGVAIMARPPGKKNSTIHLLSGGEKALTALSLVF
AIFQLNPAPFCMLDEVDAPLDDANVGRYAKLVKEMSESVQFIYITHNKIAMEAAERLMGV
TMQEPGVSRLVSVGIDEAAALVD
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttaacctctattcgtctggttgggtttaagtcctttgttgaccctgtcaccgtg
cccttcgatggcaatatgacggccatcgttgggccaaacggttgtggtaaatccaatatc
attgatgccgtgcgctgggtaatgggggagtcctcagcgaaaaccctgcgcggtgagtca
atggccgacgttatcttcaatggctcaacgggtcgtaagcccattggtcaagcgtccatt
gagctaaagttcgataaccgtgatggcggcatgggtggcgtgtatgcccagtattcagag
attgccgttaagcgcctagtaacccgagatggtcaatccaactacttttttaatggccag
aagtgccgccgtcgggatattgcggatcttttcatgggcaccggccttggcccacgctcc
tacgcgattattggtcagggaatgatttcccggctgattgaagcccggcccgatgacttg
cgcgctacgcttgaagaagccgccggtatttctaagtacaaagagcgccgccgggaaact
gaaaaccgcatgcgccgtactcaggaaaacttagagcgcctggatgatattcgtgaagag
ctggataaacagctggaacgccttaagcgtcaggcagaagcggcaaaacgctatcaagaa
ctcaaacaacaagagtaccggctaaagggcgagcttgctctattgcgcggtcgcacgctg
cgtattgagcagtcccatcaagaaagccgcgtccgcgagttggaaattgccgttgaaaaa
gacgtttttggcgttcgccagtgcgaaacacgccttgagcaagcccgtgagcagcacgat
gagctggccgaggtgcttgaccgccaccagcagcagttttacgaaaccactacgcgcatc
gcccgcctagaacaagatcaagctcaccgtcgcagccgcgatgcgcagctagcaagcgat
atcaccaccgctcgtagagacctgagcgaacagcgccgggtcagcgagggcgaccaagaa
cgcctcgcgacaatcaacgctcgcttcgatgacctactgcctgaacatgaagcgcttgag
gagcagctggagattcttgagcaaaccctcgctgacgcctcccctgcgttagaagccgcc
gagcagcagtggagtgatgccgagaatcactggcgggatgccagtcgtgaagccgaccgt
agccaagatcagctacgcaacttagagcagcgcatcacccgcctgcaaacggaaagccag
cggcgtcggcagcagcaaggggagttggccgatgtcaccgtgctacgttcagaacacgcc
gagtgtcaagagcagcgtgacgaggcggagcagcgcagcggcgcatttcaagttgaacgc
gaccagtggcagcaacgctacagcgatgccaaagccgcctaccaacaggctgttcaggcc
cgcgaccagcagcgcgccgagttaacgcaacgccaaggagagctggcttcgcttaatgcg
ttaattgaagctgcgttggccgaccacgacccaatgctagcggatgtgttagcggcccat
gaccttacagatgccccgcgcttgggagaagccattagcgtcacccaagggtgggagcgg
gtgatctcttggctgcttgagccgtggctaaatgcccgcttggtcgccactgagcaatta
aaaaccttgcctgaagcgctggcgactgactggtgtttgatcgaacaaacggcgtattca
ccgtcacttcgccaccgtctagattcgctggtaaccggcgcaggtgcactcggcgagtgg
ctggcacgtattcactatgcggaaacctctcaagacgccgaggcgctgcttgcgacccta
gcaccgggggagagtgtggtgagccgtgatggggtttggcgcggacgtggctggcttcac
cagcaggccaatggcgaaggcgtggatgcgcttttggtaacccgccgccgctatgatgag
ttagccgcccgtcgcgagcaggatgaaaaggcgctggcactgctagacgcgcagtgtgac
gccgctagtgacaccatcgaagcattagagcatacccgggagcagcaggcctcagaagag
cgcgctcatgcggcgacgctgcagcagttagcggttcaagagcagcgcctcgcccagcgg
ctggagcatttagagggccgtgccagcgagcttaacgatgaattggcacagctgcaggag
gacgaggcggaactaacgctcacgctagaagagcagcgtgcccgctggcacagtgccatg
gagcagttagaagccgctgctaacgcgcgtgaagctagcgttcagcagcgtagtcgtcag
cgcgagcaacgcgagcagctcaaccagcagcacgcgccccttaaagcgcgccagcagtcc
ctagcacttgagcgggaaaggctaactgctgaacgcgatagcctacgtgcccagcaagcc
cgcagtagcgatagtgaagagcgtctggcgctgcgtattgccgagttagaagaagcacgg
gaaatgttggtagagccggttgaacttgccgccgaagaacttgaggagctgctttatcag
cgcgaacagcaagagcgacgcttaaacgagactcgccaaaaggcccaagccctggctgag
caactgcggaatgacgagctggcccgtcagcagcatgaacgtaacctagagcagagccgt
gagcagctgcagcagcgccgcatggaagtgcaagcgctggtgctaaaggccgctacccag
gatgaacagttagccgagcttggtcatgacgcagaaacccttgccgaacacttgccccac
gacgccagtgaaaccgcatggcaggagcgtttagagagcactacggataaaattcgccgc
ttgggcgccatcaatcttgccgccattgaagagtacgaccaacaggctgaacggcgtaac
tacctggaagcccaacatgccgagttaaccgaagcgttggaaacgttggagcgtgcgatt
aagcgtattgatcaggaaacccgcgtacgctttagggaaacgtttgagcaggtgaatacg
gggctgcaaacgctatttccgcgagtatttggcggcggggctgcttggctaaccttaacc
ggggatgatcttttggaaaccggcgtggccatcatggcccgcccgccaggcaagaaaaac
agtacaattcatcttttatcggggggtgaaaaggcgctaacggcgctctccctggtcttt
gcgatttttcagctcaacccggcgccgttctgtatgctagacgaggtagatgccccgctg
gacgacgccaacgttggccgttatgccaagctagtcaaagagatgtcggaaagcgtgcag
tttatctacattacccacaataaaattgccatggaagctgctgagcgcctgatgggggta
acgatgcaggagcctggggtgtcgcggctagtctcggtggggattgatgaagccgctgca
ctggtggattag
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integrated database retrieval system
