Halomonas sp. GFAJ-1: BB497_00295
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Entry
BB497_00295 CDS
T05375
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hag
Halomonas sp. GFAJ-1
Pathway
hag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BB497_00295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_00295
DNA repair and recombination proteins [BR:
hag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BB497_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AVI61251
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Position
66816..69395
Genome browser
AA seq
859 aa
AA seq
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MSQASPSHTPMMAQYLKIKREHPEVLLFYRMGDFYELFFDDAKRAAALLDITLTQRGQSG
GKPIPMAGVPYHSAEGYLARLVAGGESVAICEQIGDPATSKGPVDRQVVRIVTPGTLHDE
ALLDARRDNVLVSVAPGKEGFGLAWLELSSGRFNVLEVESEAEMLAELTRLSPAELLVPE
SLTLPDAWSQKRSLRRQGEWLFDLDSATRSLCDQFEVQDLRGFGCAHLTTALIAAGVLVD
YARDTQRSRLPHVTAISVENRDDAVVIDAASRRNLEIDINLGGNSDNTLASVLDTCATAM
GSRLLKRWLNRPLRQRDIVEGRQAGVALLSIDAAYMALRDTLSDVGDVERILGRVALYSA
RPRDLARLRDALVTLPELEQLLAEVDTGSALDSLKPHIRPYPEMADTLTRALVENPPVVI
RDGGVIANGFDAELDEHRGMAENAGEYLVQLELRERERTGLANLKVGYNRVHGYFIELPR
SQAQQAPADYIRRQTLKNAERFIIPELKEFEDKALSAKSRALTREKWLYERLMGELNALL
HALQSTSRALAELDVLCAFAERAEALNWVRPQLVEATGISISAGRHPVVEQVSDKPFVPN
DVTLSPDQHMLIITGPNMGGKSTYMRQTALIALLAHSGSFVPADAAEIGPIDRIFTRIGS
SDDLAGGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTFDGLSLAWASAEHLATAR
ALTLFATHYFEMTSLPEQANGVANIHLTATEHGDSIVFMHRIEAGPASQSYGLQVAQLAG
VPTPVISRAREKLIALEQRDVDQQQRRAVSAGSEQGVPLQNDLFASAPHPVVEALKKADV
DDLSPREALALLYQWRELL
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggccagcccctctcatacgcccatgatggcgcaataccttaagattaaacgc
gaacaccccgaggtactgctgttttaccgcatgggggatttttacgaactctttttcgac
gacgccaagcgggccgccgcgctactggatattacccttacacaacgcggccaatcaggt
ggcaaaccgatcccaatggcgggggtgccttaccacagcgcggaaggctatttggcacgc
ctggtcgccggcggcgaatcagtggcgatttgtgaacagattggcgatcccgccaccagc
aaagggcccgttgatcgccaggtcgtgcgtattgtgacccccggcacgctccacgatgaa
gcgctgctggacgcacgtcgcgataacgtactggtatctgttgcccctggaaaagagggc
tttggccttgcttggcttgagctctccagcggacgcttcaacgtactggaagtagagagt
gaagctgagatgctcgccgagcttactcgcctctcccccgctgaactgctagtaccagaa
agcctgacgctgcctgatgcctggtcacaaaaacgtagcctgcgccgccaaggcgagtgg
ctgtttgacctggatagcgccacccgcagcctatgcgaccagtttgaagtacaggattta
cgcggctttggctgcgcgcacttaacaactgcactcattgccgccggggtgctagtcgat
tacgctcgagacactcagcgctcacgcctgccccacgtcacggcgattagcgtggaaaac
cgcgacgatgcggtggtcattgacgccgccagccggcgcaatttagaaatcgacattaat
cttggcggtaacagcgacaacaccctagccagtgttttagacacctgtgccaccgcgatg
ggctctcggctactaaagcgctggctgaatcgcccgctacgccagcgggatattgttgag
ggtcgccaagcaggcgtggcattgctgtccattgacgctgcctacatggcactgcgggac
accctaagcgacgtgggtgatgtagagcgtattcttggccgtgttgctctgtatagcgcc
cgcccacgtgacttagcgcgcctgcgtgatgcacttgttacgctgcctgagcttgagcag
ttgctggccgaagtggataccggcagcgccttagatagccttaaaccgcatattcgcccc
tacccagaaatggccgacacacttacgcgcgcgctggtcgaaaacccgcccgtggtgatc
cgcgacgggggcgtgattgccaatggctttgacgctgagttggatgaacatcgcggcatg
gccgaaaatgccggcgaatacctagttcaattagagctacgcgaacgcgagcgtacgggc
cttgccaacttaaaggtgggctataaccgcgtgcacggctattttattgaactgccccgc
tcccaggcacagcaggcacccgccgactatattcgtcgccaaacgctaaaaaacgccgag
cgctttattattccagaacttaaagagtttgaagataaagcgctttcggctaaatcgcgg
gcgctgacccgggaaaaatggctctacgagcggctaatgggcgagcttaatgcgctactc
cacgcgctacaaagcacctctcgggcactggcggagctggatgtattgtgcgcctttgcc
gagcgcgccgaagcgctcaactgggtgcgcccgcaattagtcgaagccactggcataagc
attagcgcaggccgccacccggtcgttgagcaggtgagcgataagccgtttgtgcccaac
gatgtcacgctatcgcccgaccagcacatgctgatcatcaccggccccaacatgggcggt
aaatcgacctatatgcgccaaaccgcgctaattgccctgctagctcacagcggcagcttc
gtgcccgctgacgccgctgaaattggccctatcgaccgtatctttacccgcattggctca
tcggacgacttagcgggggggcgctccacctttatggtcgagatgaccgaaaccgccaac
attctgcataacgcaacggaacacagcttagtgcttatggacgagattggccgcgggacc
agtacgtttgacggcctctctcttgcgtgggcaagcgccgagcacttagcgactgcccgt
gcattaacactgtttgccacccactattttgaaatgacctccctgcctgaacaggcaaac
ggcgtggccaacattcatttaaccgccaccgagcacggcgatagcatcgtgtttatgcac
cgtattgaggctggccctgcaagccaaagctacggcttacaggtcgcgcagctcgctggc
gtgcccacccctgtgatctcccgcgcacgggaaaaactgattgccttggagcaacgtgac
gttgaccaacagcagcgccgtgctgtctcggcaggttcagaacaaggcgtgccactgcag
aacgacctgtttgccagcgcccctcaccccgttgtagaggcgcttaaaaaagcggacgta
gatgatttatcgcctagggaggcgttggcactgctgtatcaatggcgcgaactcctgtga
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