Halomonas sp. GFAJ-1: BB497_00475
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Entry
BB497_00475 CDS
T05375
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hag03016
]
BB497_00475
Enzymes [BR:
hag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
BB497_00475
Transfer RNA biogenesis [BR:
hag03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
BB497_00475
Prokaryotic type
BB497_00475
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AVI61283
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All DBs
Position
complement(112509..113471)
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AA seq
320 aa
AA seq
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MNLLFLGTSAGVPTKTRSVSGVALRESKGKGWYLIDCGEGTQHQVLHTKLSFHSLKAILI
THVHGDHCYGLPGILASATMGGRTAPLTIVAPAGIQTWLEATCAVTQLSLPFALEFICSD
ELPCVEFESMAVTTFVLSHRVPCYAYAFTERNVDAALDVDKLDQQGIPRGPLWGQLKQGM
DVAFEGKQLRSQDYLLFKHAPRKVVIAGDNDQPELLAQACAGAQVLVHEATYTEEMAQKA
GEVGHSYGKQVAAFAERVTLPNLVLTHFSPRYPLISHASPSIEDIRKEAHSAYSGTLYMA
QDFGEYSLDKAGRFSELVGE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactcttcctaggcacctccgccggtgtcccgactaaaacaagaagcgtctcc
ggcgtcgctctgcgagagagcaaggggaagggctggtacctgatcgattgtggtgagggc
acccagcatcaggttttgcatacgaagctgtctttccattccttgaaagccatcttgatt
actcacgtacacggcgaccactgctatgggctgccgggcattctggccagtgcgaccatg
ggtgggcgcacagcaccgctgactattgtggccccggcgggtatccaaacttggctggaa
gcgacatgtgcggtcacccagctcagcttgccctttgctctggaatttatctgctccgat
gaactgccctgcgttgagtttgagagcatggcggtaacgacgtttgtgctttcccaccgc
gtgccgtgctatgcctatgcgttcaccgagcgcaatgtggatgctgccctggacgtagat
aaattagatcagcaagggattcccagagggcctttgtgggggcagttgaagcaaggaatg
gatgtagcgtttgaaggcaagcaactgcgcagccaggattatttgctgttcaaacacgcc
cctagaaaagtggtgattgccggagacaacgaccagcccgagctgttggcgcaagcgtgt
gctggagcgcaggtgttggttcacgaggccacctacaccgaagaaatggcccagaaggcc
ggtgaggtagggcatagctacggcaagcaggtggcggcatttgccgagcgggtcacgctg
cccaacttggtgctcacccactttagcccccgttatccgcttatctctcatgcctctccc
tccattgaggatatccgtaaagaggcgcacagcgcttattcaggcacgctctacatggcg
caggattttggcgaatacagcttggataaggcgggccgcttttctgaactcgtgggcgag
tag
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integrated database retrieval system
