Halomonas sp. GFAJ-1: BB497_00660
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Entry
BB497_00660 CDS
T05375
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hag03009
]
BB497_00660
Ribosome biogenesis [BR:
hag03009
]
Prokaryotic type
GTPases
BB497_00660
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
RsgA_GTPase
AIG1
AAA_22
cobW
Roc
AAA_24
ABC_tran
AAA_18
MeaB
AAA_28
ATP_bind_1
SRP54
EIIA-man
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
AVI61316
UniProt:
H0J558
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All DBs
Position
156697..158100
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AA seq
467 aa
AA seq
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MTPVIALVGRPNVGKSTLFNRLTRSRDALVADFPGLTRDRKYGNGMLGGKSYTVIDTGGI
SGDEEGIDAAMAEQSLAAIDEADIVLFLVDARAGLNVADEAIANHLRVNQKKTWLVVNKT
DGLEEHSAMADFWKLGLGDPWPIAAAHGRNVSLLIDTVLEPFPERDASIPADTGSKGIRI
GVIGRPNVGKSTLVNRLLGEERVVVFDEAGTTRDAIEIPFERNGKPYVLIDTAGIRRRKN
VREIAEKFSIIKTLDAIKECHVAVMVLDARSGLVEQDMHLLDYVLTTGRALVLAINKWDG
LESDAKEKMRAEIKRRLGFADYAEIHFISALHGTAVGDLYPSIERAFNAANAHWSTNRLT
TLLQDAVSQHPPPMVNGRRIKLRMAHQGGSNPPIIVVHGNQTASLPEAYRRYLTNTFRKV
LKVRGTPMRFEFRTGDNPFDHMAGASDKEKAKKRELNRTKEARKSRR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacacccgtcattgctttagtcggtcgacccaacgtgggtaaatcgacgctgtttaac
cgcctgacgcgttcgcgtgatgcgctcgtggccgattttcctggcctcactcgtgaccgc
aaatatggcaatggcatgttgggcggcaagtcatacaccgtcattgatactggcggcatt
agcggtgatgaagaaggcatcgatgccgcaatggcggagcagtcgttagctgctattgat
gaagccgatatcgtgctgtttttggttgatgcccgggcagggctaaacgtcgctgacgag
gccattgccaatcacctgcgtgtaaaccagaaaaaaacctggctggtagtgaataaaacc
gatggcttggaagagcactcggccatggctgacttttggaagcttggcctgggtgacccc
tggcccatcgctgccgcccacgggcgtaacgtatcgctgctaatcgataccgtactagag
ccgttccctgagcgcgacgccagcatccctgccgatacgggcagtaaagggattcgtatt
ggtgtgattggccgcccgaacgtgggtaaatccacgctagtcaaccgcctgcttggcgaa
gagcgcgtggtggtgttcgatgaagccggcaccacccgggatgccatcgaaatacccttc
gagcgtaatggcaaaccttacgtattaattgatactgccggtattcggcgtcgtaagaac
gtgcgcgaaatcgccgaaaagttctcgatcatcaaaaccctcgacgcgatcaaagagtgc
catgttgcagtgatggtactcgatgcacgcagcggtttggttgaacaagacatgcacctg
ctggattacgtgctaaccactggccgagcgctagtgctagccataaacaagtgggatggc
cttgagagcgacgccaaagagaagatgcgcgcggaaattaaacgccgtttaggctttgcc
gactatgccgagatacactttatctcggctctgcacggtacggcggtgggtgatctatac
ccttcgattgaacgcgcctttaacgccgctaacgcacactggtcaaccaaccggctgacc
acattgctgcaagatgcggtaagccagcacccaccgccgatggtcaacgggcggcggatc
aaactacggatggcccaccagggcggcagcaacccgcctatcattgtggtacacggcaac
cagaccgcgtcgctgcctgaggcttaccgccgctacctgaccaacacctttcgtaaagtg
ttaaaggtacgcggcacacctatgcgctttgaattccgtacgggcgacaatccgttcgac
catatggcgggcgccagcgataaagagaaggctaaaaagcgcgagcttaaccgcaccaaa
gaagcgcgtaaaagccgccgctag
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