Halomonas sp. GFAJ-1: BB497_00880
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Entry
BB497_00880 CDS
T05375
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
hag
Halomonas sp. GFAJ-1
Pathway
hag02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BB497_00880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hag02000
]
BB497_00880
Transporters [BR:
hag02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
BB497_00880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AVI64218
LinkDB
All DBs
Position
complement(198859..199896)
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AA seq
345 aa
AA seq
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MSAVAGILLLVIMGSRFIRYFADAAEGDIPVTILGSLMFFHLPGFMELILPLSFFLGILL
AYGQLYMNSEITVMVACGMSPARLLRVTLLPASVVAVLVGVCSLWLTPAGALLTEATLEE
QRSRLDVSILAPGRFQDFGGGRTAYIRDFSSDGRQMQDVLVHEQAQPNAESTHSYVTRAG
AGYQETNLATGSRFLVLEEGERYGVTPGRQEAERLTFERYTLRLGLSRSRQELDSLEYAT
TFELWSDPDPRAQAQFQWRLGLPFMVFILALLAQPLSRVNPRQGRFAKLLPAVFLYVAYL
SLLLAAVDAIGSGSLSATIGVWPVHALFLGLGCLLLWRSQRKGMR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgtggccggtattcttctattagtcattatgggcagtcgcttcatccgttat
tttgcggatgctgccgagggcgatattcccgtcaccattctgggcagtttgatgtttttt
cacctgccggggttcatggaactgattctgccgctgtcattttttctgggcatcctgttg
gcctatggacagctctacatgaacagcgaaattactgtgatggtggcctgcggcatgagc
cccgcacggcttttacgggtaacgctgctgccagcctccgtggtggctgtgttggtcggg
gtgtgcagcctgtggttgacgcccgccggcgcattactgaccgaggctaccctggaagag
cagcgtagccgattggatgtttcgatattagcaccgggccgctttcaggactttggtggg
gggcgtacagcctatattagagatttcagtagtgatggtaggcaaatgcaggatgtgctg
gttcatgaacaagcgcagcccaatgcagaaagtacccatagctacgtgacacgggctggg
gcaggctatcaggaaactaacctcgccaccggcagccgctttttagtactggaagaaggg
gagcgctatggggtgacgccagggcggcaagaggccgagcgtttaacctttgagcgctat
acgctgcgcttggggttaagccgcagtcgccaggagctggattcactcgagtatgcgact
acctttgagctatggagtgaccccgacccgcgcgctcaggcacagtttcagtggcgatta
ggcctgccgttcatggtgtttatcttggcgctgctggcgcagccgctctctcgcgttaat
cctcggcaagggcgctttgcaaagctactgcctgcggtgtttctttatgtcgcctatttg
agcctactactggccgccgtggatgctattggcagcggctcattgtcagcgaccatcggc
gtgtggccagtgcacgcgctattcttgggccttggttgtctactgctatggcgttcacaa
cgtaaggggatgcgttaa
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