Halomonas sp. GFAJ-1: BB497_01240
Help
Entry
BB497_01240 CDS
T05375
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hag03021
]
BB497_01240
Transcription machinery [BR:
hag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BB497_01240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SWC7
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AVI61427
UniProt:
H0J206
LinkDB
All DBs
Position
complement(278306..279172)
Genome browser
AA seq
288 aa
AA seq
DB search
MSTSLIPVGQLSPGHDLGGYIQAVNGIPVLSVEEERELAFRLHDEGDLEAARRLVLSHLR
FVVHIARSYSGYGLPQADLIQEGNVGLMKAVKRFDPNQGVRLVSFAVHWIKAEIHEFVLR
NWRIVKIATTKAQRKLFFNLRSAKKRLSWLNNDEVSAIAKDLDVKPEIVRDMEGRLSAFD
AGYDASPGEDDESTYQAPAFFLDDASADPASQIEDSDFEEDSTRRLQLALKDLDERSRDI
LQRRWLTDDKATLHDLADIYGVSAERIRQLEKNAMKKLRQKMGEALAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagtcttataccggtgggacagctttctccaggccatgacctgggcggctat
attcaagcggtaaacggtattcctgttctcagtgttgaggaggagcgtgagctcgcattc
cgcctccacgatgaaggggatctcgaagctgcacgccgtctggtgctttcgcacttgcgt
tttgttgtgcacattgcccgcagttactcaggctacggcttaccccaggcggatctgatc
caagagggtaacgtcggcttgatgaaggccgtcaagcgctttgatcctaatcagggtgtg
cgtttggtgtcttttgccgtgcactggatcaaagcagaaattcacgagtttgtactgcgc
aactggcgaattgtaaaaatcgccaccaccaaagcgcagcgtaagctgttcttcaacctg
cgcagcgctaaaaagcgtttatcctggttgaataacgacgaagtcagcgcaattgctaaa
gacctcgatgttaagccggagattgttcgtgacatggagggccgcctttcggcgtttgat
gcaggctatgatgcctctcccggtgaagatgacgagagcacgtatcaagcgcctgccttc
tttctagacgatgcctcggcagatccagcatcacagattgaagatagcgactttgaagag
gactccacgcgtcgtcttcagttggcgctgaaagatctggatgagcgctcacgggatatt
ttgcagcgtcgttggttgaccgacgataaagcaacgcttcacgatcttgccgacatatac
ggcgtgagcgctgagcgcattcgacagctcgaaaagaacgcaatgaaaaagctgcgtcag
aaaatgggcgaggcgttagccgcgtaa
DBGET
integrated database retrieval system
