Halomonas sp. GFAJ-1: BB497_02820
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Entry
BB497_02820 CDS
T05375
Name
(GenBank) preprotein translocase subunit SecY
KO
K03076
preprotein translocase subunit SecY
Organism
hag
Halomonas sp. GFAJ-1
Pathway
hag02024
Quorum sensing
hag03060
Protein export
hag03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BB497_02820
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BB497_02820
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BB497_02820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hag02044
]
BB497_02820
Secretion system [BR:
hag02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BB497_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-ProteinID:
AVI61708
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All DBs
Position
complement(635581..636912)
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AA seq
443 aa
AA seq
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MAKSGNMPAMGSGLSELWARLRFVLLAIVVYRIGAHIPVPGINPDQLAALFREQQGTILG
MFNMFSGGALERMSVLALGIMPYISASIIMQLMTAVSPHLEQLKKEGEAGRRKISQYTRY
GTVLLAFVQATGMSVGLASQGIAYSADFSFYFTAIITFVSGAVFMMWLGEQITEKGIGNG
ISLLIFAGIVAGLPSAVGQAFELARNEGAWNVLPLLALSVLGIATVAFVVFIERGQRRLK
VNYPRRQVGNKMYAGQSSYLPLKVNMAGVIPAIFASSILLFPASIGQWVGAGEGMEWLQR
ASQALGPGQPLYILLFGAAVVFFCFFYTALVFNPKDVADNLKKSGAFLPGIRPGEQTARY
IDKVMTRLTLFGALYITAVSLMPQFLIVAWNVPFFFGGTSLLIVVVVIMDFMAQVQSHLM
SHQYDSVMKKSNLKGYGSGGIMR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtcaggaaatatgccggcgatgggcagcggtctgagtgaactgtgggcgcgt
ttgcgcttcgtgctcctcgccatcgtggtgtaccgtatcggtgcccacattcccgttccc
ggtatcaatcctgaccagcttgctgccttgtttagggagcaacagggcaccatcctgggc
atgtttaacatgttctcgggtggcgccctggagcgtatgagtgtcctcgccttgggcatt
atgccttacatctcggcgtcgattatcatgcagctcatgactgcggtctcccctcatctt
gaacagctcaagaaagagggtgaggccggccgccgcaagattagccagtacacccgctac
ggcacggtgttgctggcatttgtccaggccaccggtatgtccgtcggtctggctagccaa
ggcatcgcgtacagcgctgacttcagcttctatttcactgccatcatcacgtttgtgtcg
ggtgcggtgtttatgatgtggctaggtgagcagatcaccgagaagggcattggcaacggt
atttcgttgctgatcttcgcgggtattgtcgccgggctgcccagtgccgtggggcaagcg
tttgagcttgctcgtaacgaaggggcctggaatgttcttccgctgttagcgctgtcagtg
ctaggtattgccactgttgccttcgtggtgttcattgagcgcggtcaacgccgactcaag
gtgaattacccgcgacgtcaggtgggcaataagatgtatgcaggccaaagcagctacctg
cccttgaaagtgaatatggctggcgttataccagcaatttttgcttccagtattctactt
ttcccggcctcaattggtcagtgggtaggcgctggtgaagggatggagtggttgcagcgt
gcatcacaagcgttgggccctggccaaccgctttacatcttgctttttggcgcggcggtg
gtattcttctgcttcttttacacagcgctggtcttcaaccccaaggatgtggctgacaat
cttaaaaagtcaggcgctttcctgccgggcattcgccccggcgagcagaccgctcgctat
atcgacaaagtgatgacacgtcttactttgttcggtgccttgtatatcactgcggtttcc
ttgatgccccagttcttgatcgtagcgtggaacgtaccgttcttcttcggcgggacgtcg
ctactgatcgtagttgtggtcatcatggacttcatggcccaggtgcagtcgcatctcatg
tcgcatcaatatgactcagtgatgaagaagtccaacctgaaaggctacggtagcggcggc
atcatgcgctga
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