Halomonas sp. GFAJ-1: BB497_03105
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Entry
BB497_03105 CDS
T05375
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_03105
Enzymes [BR:
hag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BB497_03105
DNA repair and recombination proteins [BR:
hag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BB497_03105
Prokaryotic type
BB497_03105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AVI61759
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All DBs
Position
687651..689063
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AA seq
470 aa
AA seq
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MNVQLVWLRSDLRIHDNSALAAAAAKGPVVAIFLRSVKQWQSHGHGANKIDFWARGVAAI
KESLNGLNIPLLHRDIDAYEEAPQVLLDIAREHNVEQLHFNIEYPLNEQHRDRAVREAFK
QHGINVQAHHDGIAFAPGSLLTGKGDYYGVFTPFSKAWHKQITAEQLALRDTPNVQTPLA
IESDPLPERPTLDDEPVDARLWPAGESAASDNLERFLRFRGRHYKAQRDLPKVHGTSELS
PYLALGMLSYRQCLQAVMSENGGHLADGDAGLTTWVSELIWREFYQHVAVGFPQVCRYQP
FQAHTQQLQWRDDDEDFKAWCEGRTGYPLVDAAMRQLVATGWMHNRLRMVTAMFLSKHLL
IDWRRGEAFFMRHLVDGEFCANNGGWQWAASTGTDAAPYFRIFNPTTQSTRFDAEGEFIA
HWLPALESLPAKARHAPPRDMLTQLDYPAPIVDHKAARQRALDAFKALSK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtacagctagtatggttgcgcagcgatctgcgtattcacgacaactcagcgctc
gcggctgccgcggccaaggggccggttgtcgccatttttttgcgcagcgttaagcagtgg
caatcccacggccatggcgctaataaaatcgacttctgggcgcgcggcgtggcggctatc
aaagagtcgcttaacgggcttaatattcccttactgcaccgcgatattgacgcgtacgaa
gaggcaccacaggtattgctggatattgctcgcgagcataacgtagagcagctccacttc
aacattgagtacccgttgaacgagcagcatcgcgatcgggccgttagagaggccttcaag
cagcacggaattaacgttcaagcgcaccacgacgggattgccttcgcccccggcagccta
ttaaccggcaaaggcgattattacggcgttttcaccccattttccaaagcttggcacaag
cagattaccgccgagcagctagcgctccgcgacacccctaacgtgcagacgccattagcc
atcgaaagcgacccgctacccgagcgaccaacgcttgatgacgaaccagtggatgcgcgc
ttgtggccagctggcgaaagcgccgccagcgataacctagagcgctttttacgttttcgt
ggccgtcactataaggcccagcgcgacctgcccaaggtacacggcaccagcgagctttca
ccctacctagcgctgggaatgctctcctatcgtcaatgcttacaagcggtaatgagcgaa
aacggcggccatttagccgatggcgatgcgggcctaaccacctgggtgagtgaacttatt
tggcgggagttctatcagcacgtggcggtggggtttcctcaagtgtgccgctatcagccg
ttccaagcgcatacccagcagctacagtggcgtgatgacgacgaggactttaaggcgtgg
tgcgaagggcgtaccggctacccgctggtagatgccgctatgcgccagctagtggcaacc
ggctggatgcataatcggctaaggatggtcaccgcaatgttcttgagcaagcatttgctg
atcgactggcgccgtggtgaagcattttttatgcgccatttagtcgatggtgagttctgc
gccaataacggcggctggcagtgggcggcctctactggtaccgatgcagcgccttatttc
cgcatttttaaccccactacacagtcaacccgctttgacgcagagggggagtttatcgcc
cactggctaccagcgctggaaagcttgccagcgaaagcgcgccacgctccaccacgcgat
atgcttactcagctggactacccagcgcctatcgttgaccacaaagccgcccgtcagcgt
gcgctggacgcttttaaagcgctctctaaatag
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