Halomonas sp. GFAJ-1: BB497_04325
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Entry
BB497_04325 CDS
T05375
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hag03000
]
BB497_04325
Transcription factors [BR:
hag03000
]
Prokaryotic type
Helix-turn-helix
Other families
BB497_04325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MamL-1
Motif
Other DBs
NCBI-ProteinID:
AVI61979
UniProt:
H0J1G6
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Position
complement(943067..943921)
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AA seq
284 aa
AA seq
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MSRALFDEMRRRMEHFRRSEQKVARFVLRNPDEVIHMRIVDLATEAKVSEPTVVRFCRAL
GCNGFQDFKLQLAQMLASGSQFAQFSMNDSDSVAEFSHSIFDSTVGTLLSVRDRLDNEAL
GKAVNALAMANRVEFYGFGASGAVAFDAQHKFFRLQISTSAYADPHMQNMSAVTLKEGDV
VVAISQTGRTKALVASVRLARDAGATVIGLCPSDSPLASEVSLPLYIDVHEDTEIYTPLS
SRIAHLVLIDVLAVGVAKTRGPKLAEQLKAVKKSLNTLRYPEES
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcgccctgtttgatgaaatgagacgccgcatggagcacttccgtcgctccgag
caaaaggttgcacggtttgtactgcgcaatcctgacgaagttatccacatgcggattgtg
gatctcgccacggaagccaaagtgagcgagcctacggtggtgcgtttctgccgcgcattg
ggctgcaacggcttccaggacttcaagctacagctggcacaaatgctggccagcggcagc
cagttcgcccagttctccatgaacgacagcgactcagtcgcagaattttcccacagcatt
ttcgactccaccgtgggcacgctgttatcggtgcgcgaccgactcgacaacgaagcctta
gggaaagccgttaacgccttggccatggccaaccgagttgagttctatggctttggggcc
tctggcgcggtggctttcgacgcccagcacaagttcttccgcctgcagatctccacctcc
gcttacgccgacccgcacatgcagaatatgtctgcggtgaccttaaaagagggcgacgtg
gtggtggcgatctcccagacgggccgcaccaaagcgctggtggctagcgtacgtttggct
cgcgatgcgggcgcgacggtgattggcctctgcccaagcgactcaccgctggccagcgag
gtcagcctgccgctgtatatcgatgttcacgaagacaccgagatctatacgccgctaagc
tcccgcattgcccacctagtgcttatcgacgtattagcagttggcgttgccaaaacccgc
gggccaaagctcgccgagcagcttaaagcggttaaaaagagccttaacaccctgcgctac
cccgaagagagttaa
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