Halomonas sp. GFAJ-1: BB497_05565
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Entry
BB497_05565 CDS
T05375
Name
(GenBank) sigma factor SigB regulation protein RsbQ
KO
K19707
sigma-B regulation protein RsbQ
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hag03021
]
BB497_05565
Transcription machinery [BR:
hag03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BB497_05565
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Gene cluster
GFIT
Motif
Pfam:
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
Abhydrolase_4
Motif
Other DBs
NCBI-ProteinID:
AVI62213
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Position
1216567..1217355
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AA seq
262 aa
AA seq
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MLRNNVTIIGTGEKTLMLAHGFGCDQNMWKYIAPQLKERYTLVLFDYVGSGHSQASAFSE
SRYSTLEGYALDVNEICEALDLNDVHFVGHSVSTSIGLLAANASPERFASHVMICPSPCF
LNMPPDYYGGFEKHDLEELIDLMGRNYIGWANYLAPLVVGSENASVFIDELSSSFCSTDP
VLAQTFAKATFFSDYRHLLPQAQHAALVLQSQDDALANPEVGRYIHAQMPQSTLRIMESE
GHCIHMTHPALVLREIQAWLDD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcaataatgtaacgattatagggactggcgagaaaacactaatgctagcccat
ggttttggctgtgatcaaaatatgtggaaatatatcgctccccagttaaaagagcgctac
acgctagtgttatttgactatgtagggtcaggtcattcgcaagcatccgcttttagtgaa
tcacgctatagtacgctggaaggctatgccctcgatgtaaacgagatatgtgaagcgcta
gaccttaacgacgtgcatttcgtaggtcactcggttagtaccagtattggtttgcttgcc
gctaatgctagccccgagcgttttgccagtcacgtcatgatttgcccatcgccctgtttt
ttaaatatgccgccggactattacggtggttttgaaaaacacgaccttgaagagctgatt
gatcttatggggcgcaattatatagggtgggctaattacctagcaccccttgtagtgggc
agcgaaaacgcatcggtattcattgatgagctttcaagcagtttttgctctaccgatccg
gtgctggcgcagacattcgcgaaggctacgttcttttcagactatcgccatttactgcca
caagcacagcacgctgcgcttgtgcttcaaagccaagatgatgcgcttgccaacccggaa
gtcggtcgttacattcatgcgcagatgcctcagagcacgctgcgcataatggaaagcgaa
gggcactgtatccacatgacacacccagcgcttgttttgcgagaaattcaggcctggtta
gatgactaa
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