Halomonas sp. GFAJ-1: BB497_05590
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Entry
BB497_05590 CDS
T05375
Name
(GenBank) pilus assembly protein PilC
KO
K02674
type IV pilus assembly protein PilY1
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hag02044
]
BB497_05590
02035 Bacterial motility proteins [BR:
hag02035
]
BB497_05590
Secretion system [BR:
hag02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
BB497_05590
Bacterial motility proteins [BR:
hag02035
]
Pilus system
Pilus assembly proteins
BB497_05590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
AVI62217
UniProt:
H0J179
LinkDB
All DBs
Position
complement(1221349..1224828)
Genome browser
AA seq
1159 aa
AA seq
DB search
MKHIRFLPLILAATFMLSMVNEPAYGFAPPPPPDYDPDEDLDLDDPEPEPTPDPPPEPEP
PIGGGDDAPIDEEFDIPSDRVGISPAPLNVVSRVPPNVLLILDNSESGQEGLDGRVAIGE
EDGDRENLTACQPNTFNASACPAGARSPLSKSSTMKRVGLQIIEDYRNSINLGLMAYQQN
PASTDRNSFNSGNTVVWRLTERAVDVRYSTRSNPDWYNPAFEGAWNSTIKRYRTRLPNSD
FYAFFNVGVPGYFTVNRTSTSLPGPSDDRTEYWRTDTYPTSRQDQTVDRYRELTQSSSCG
RSCTRPDAPHGVYYADYVASAGLPLVDSLRQRGIPNWGAHVLSLQLNQREWRTTSSPGLG
YLHVPIGGLNDDGTVNSAHWEAIETKLGTQRHDWSGHGNPLTDPEWPLISAGLTPIEGTM
YTARDYFLNNGGSGNSFRREQGYRTDISIPNLNNPEAQQCLVNANIWLTDGLPSVDRSGN
SLGNNVSGALASAEAALKRLYDDTGARLANPVRTYVVGFNMPPDIANLPNVSDDPLGDLA
RAGGTERAYFANDEASLNQVMQQVLGNIIAASQSNTSAAVNSDEFGVEDGNLLYTAGFRS
EDWSGRLAASEIQTDGSRSQRWNAETVLSQQIGSRRLLTSQRPEGGSRVGVELAANTSGL
SNDEVSWLKGNPVPGLRQRQSLLGDIINANPVLLQGSGNRPPLLMVAANDGMLHGFNANT
GRELFAYLPAELTQGENPPLRELTRPDYTHRYFMDGTPAVREVNIENGPSAVVVGTMGAG
GRTVFALDVSNPGNAELLWEFRHPELGTGVSQPTITQLTDGRWVAIFGNGYNSTSYQASL
FVVDIKKAANARGPTFLHLKTNTGSEAAPNGLATPTVTAWPWRNDNSANGARFAYAGDLA
GNMWRFPLTEGGSVNRLYQGSADQPITSAPAVTMSSGSTDTLMVLFGTGSYFRNSDVGDS
APQQFLGIQDRVGRTATYGTSDLVTQHITGNASRDGFNLRASTNLAPSSNQRGWRIELPP
GERVIAAPSISSSLPRRVRFSTLLPDESDPCGGGRSGFFMSLLADTGGSGGSTTFDLSGD
GKPDIDATINGDAITGLQAGTGERLVGVNDGQVERLFIGNPDDPNASPNGDGSIAIGFSD
EHIGRRSWRQLFDEEEADI
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcacatccgttttttaccattaattctggccgccacctttatgctaagtatggtt
aatgaaccagcttatggatttgctcctcccccacccccagattatgatccagacgaagac
ctggatctggatgaccccgaaccagaaccaacgcctgatccgccaccagagccagagccc
cccattggcggaggtgacgatgcccctatcgacgaagagttcgatattcccagtgaccgt
gtcggtatttccccagcgcctttgaacgtcgtcagccgagtgccccccaatgtactgctg
atcctggacaactcggaaagtggccaagaggggctggatggccgagtggccattggtgag
gaagacggtgaccgagaaaatctgacggcctgccagcccaatacgttcaatgcctccgca
tgcccggcgggcgcacgctcgccgctgagcaaatcgagcaccatgaagcgtgttgggtta
caaataatcgaagactatcgtaatagcatcaatctgggattaatggcctatcaacagaac
cccgcctctaccgacagaaatagtttcaattctggcaacaccgtagtgtggcgcctgaca
gaacgtgctgttgacgttcgctactcaacgcggagcaacccagactggtacaaccctgct
tttgagggcgcatggaactccaccattaaacgctatcgcactcgtttacccaacagcgat
ttctacgccttttttaatgttggtgttcctggttattttactgttaatcgtacatcaaca
agccttccagggccttcagacgacagaacagagtattggcgtactgatacttaccccact
tccaggcaggatcaaaccgtagatcgataccgcgaactcacacaatccagtagttgcggc
cggtcttgcactcgtcctgacgcgccccatggtgtttattacgcagactacgttgcttca
gctggtcttccactcgtagacagcctgcgccagcgcggcatccccaattggggggctcac
gtattatccctccaactgaatcagcgggagtggcgtaccacatcgtcacctggactcggt
tatttacatgtacccattggtggactcaatgacgatggcacggtgaacagtgcccattgg
gaggcgatcgagaccaagctgggcacccaacgtcacgattggagcggccacggaaatccc
ctgacagatccagaatggccccttatctctgcgggcttgacccctatcgaaggcaccatg
tacaccgcgcgtgattacttcttgaacaacggtggcagcggcaactccttccgacgcgaa
caggggtaccgtacggacatctcgattcccaacctcaataaccccgaggcgcagcagtgt
ttagtgaatgccaatatttggctgaccgatggcttaccctcggtagatcgctccggcaac
tcgctaggcaataacgtcagtggcgctctggccagcgccgaagcggccctcaaacggctt
tatgacgataccggggctcggctcgcgaaccctgtgcgcacctatgtggtcggcttcaac
atgccgccggacatcgccaacctccccaatgtctcggacgacccgttgggcgacctggcc
cgcgctggtggcaccgagcgcgcctactttgccaacgacgaagcttcgttgaaccaggtg
atgcagcaggtgctgggcaatatcatcgctgcctcccaatccaacacctcggcagcggtg
aacagcgatgagttcggtgtggaagatggcaatctgctctataccgccggatttagaagt
gaggattggtcagggcgcttagccgcctcagaaattcaaacggatggcagccgtagtcag
cgctggaatgccgagacagtgctgtcccagcaaattggtagtcgtcgattactaacatcc
caacgtcctgaaggtggtagtagagtgggtgtagagctagccgccaacaccagcggatta
agtaatgatgaggtgagttggctaaagggcaaccctgtgccgggtctaagacagcgtcag
tcgctgctgggtgatatcatcaacgccaatccggtgcttctgcaagggtctggtaaccgc
ccgccgctgctaatggtggccgccaacgacggcatgctgcatggtttcaatgcaaacacc
ggacgtgagctatttgcctatttacccgccgagctaacacagggcgagaatcctccgctg
cgcgagctgactcggccagattacacccaccgctactttatggacggcaccccagcagta
cgggaggttaatattgagaatggcccctctgccgtggtggtcggcaccatgggcgctggc
gggcgaacggtattcgcgctagatgtcagtaaccccggcaatgctgagttgctctgggag
tttcgccatccggaattagggacaggggttagtcaacccacgattacccaacttaccgat
ggcaggtgggttgccatttttgggaatggttacaacagcaccagctatcaggcatcgcta
tttgttgtcgacataaaaaaagccgccaacgcgcgaggcccgacctttttacacctcaaa
accaacaccggtagcgaagcggcccccaacggtttggcaacgcccaccgtcacggcctgg
ccatggcgcaacgataacagcgcaaacggtgcccgctttgcttacgcaggcgacctggca
ggcaatatgtggcgctttccgctcacggaaggcggcagcgtcaatcgtctctaccagggt
agcgccgaccagccaatcacttccgccccggcggtgacaatgagcagtggctctactgac
acgctgatggtgctatttggcaccggcagctatttccgtaacagtgatgtcggtgatagc
gcacctcagcaattcttgggtattcaggatcgtgtagggcgcaccgcgacctacggcacg
tcagatctggtgacccagcacattaccggcaatgcgtctcgggatggcttcaacctgaga
gcgagcaccaatcttgcaccttccagcaaccagcgtgggtggcgcatagagctgcccccg
ggcgaacgcgtgattgccgcgccatcgatatccagcagcctgccacgccgcgtccgcttc
tctacactactccccgatgagtccgacccctgcggcggcgggcgtagcggtttcttcatg
tcgctgctggctgacacaggtggcagcggcggttccactacctttgacctcagtggcgac
ggaaagccggacattgatgccactatcaacggcgatgctatcacgggtcttcaagctggc
acaggtgagcgcttagtaggcgttaacgatgggcaagtagagcgcttgtttatcggcaac
cccgatgaccccaacgcttcacctaatggggatgggtcaatagctattggctttagcgat
gaacacataggccgtcgctcatggcgtcagctgtttgatgaagaagaggccgatatataa
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