Halomonas sp. GFAJ-1: BB497_05745
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Entry
BB497_05745 CDS
T05375
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
hag
Halomonas sp. GFAJ-1
Pathway
hag00250
Alanine, aspartate and glutamate metabolism
hag00310
Lysine degradation
hag00350
Tyrosine metabolism
hag00650
Butanoate metabolism
hag00760
Nicotinate and nicotinamide metabolism
hag01100
Metabolic pathways
hag01120
Microbial metabolism in diverse environments
Module
hag_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BB497_05745 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BB497_05745 (gabD)
00310 Lysine degradation
BB497_05745 (gabD)
00350 Tyrosine metabolism
BB497_05745 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BB497_05745 (gabD)
Enzymes [BR:
hag01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BB497_05745 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BB497_05745 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BB497_05745 (gabD)
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Motif
Pfam:
Aldedh
THUMP
Motif
Other DBs
NCBI-ProteinID:
AVI62244
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Position
1257392..1258843
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AA seq
483 aa
AA seq
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MSFIEQWLHNAVPALVGDEWRKGQQTFAVDNPATGETIAHVADLSADDTRDAVAAAYEAG
AAWRATPVKQRSALLRRWFELVNEHADDLARLMTLEQGKPLAEAKGEVTYGASFIEFFAE
EAKRMAGETLPSHGADKRLLVLREPVGVVAAITPWNFPLAMITRKCAPALAAGCTVVIKP
AEATPLTALAAAYLALEAGLPAGTINVVTASKPAAVGEVLTTDPRVRKVSFTGSTPVGKH
LLAQCASTVKKTAMELGGNAPFIVFDDADVDAAVNGAIASKFRNAGQTCVCTNRFLVQDG
IYDAFVAKLTERVNALKVGDGLADGSIIGPLINQAAVDKVQRHVDDAVNKGARLLCGGQP
HAAGERFFTPTVLADVTTEMTVADEETFGPVAPVFRFQRDEEAIAMANDTPFGLAAYFYA
TDYRRIWRTMEQLEYGMVGVNEGLISTELAPFGGVKESGLGREGSHHGLDEFTELKYVCV
GGL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagctttatcgaacagtggttgcacaatgccgtccccgccctggtgggcgacgagtgg
cgcaaaggccagcagacctttgccgtcgataaccccgccaccggcgagaccattgcccac
gtggcggatttaagcgccgacgacacccgcgacgccgtggccgccgcttatgaagccggt
gccgcgtggcgcgccactccggtgaaacagcgctcggccctgctgcgccgctggtttgag
ctggtcaatgagcacgccgacgacctagcccgcctgatgaccctggagcagggcaagccg
ctggcggaagccaaaggcgaagtgacctacggcgcatcgttcatcgagttcttcgccgaa
gaagccaagcgcatggcgggggaaaccctgcccagccacggcgcggataaacgcctgctg
gtactgcgcgagccggtgggcgtggtggcggcgattactccgtggaacttcccgctggcg
atgattacccgcaagtgcgccccggccctggccgctggctgcaccgtggtgattaaaccc
gctgaagccacgccgctcaccgcgctggccgctgcctatttagcgctggaagcgggcctg
cccgcaggcaccattaacgtggtgaccgcatcaaaaccggcagcggtaggtgaagtgctc
accaccgacccccgagtgcgcaaagtgtcgtttactggctccacccctgttggcaaacac
ctgctcgcccagtgcgccagcacggtgaagaaaaccgccatggaattgggcggcaatgcg
ccctttatcgtgtttgatgacgccgatgtggacgccgccgtgaacggggccatcgcctcc
aaattccgcaacgccgggcaaacctgcgtgtgcaccaaccgcttcctggtgcaggacggc
atttacgatgccttcgtcgccaagctcaccgaacgtgtgaatgcattgaaggtaggcgac
ggcctggccgacggcagcatcatcggtccgctgatcaaccaagccgccgtggataaagtg
cagcgccacgtcgatgacgcggtgaataaaggcgcgcgcctgctgtgcggtggccagccc
cacgcggcgggggagcgcttctttacccccacggtgctggcggatgtgaccaccgaaatg
accgtggctgatgaagagaccttcggcccggtcgcgccggtgttccgcttccagcgcgat
gaagaagccatcgccatggccaacgacaccccgtttggcctagccgcttacttctacgcc
acggattatcgccgcatctggcgcaccatggagcagttggagtacggcatggtgggcgtg
aacgaaggcttgatctctaccgagcttgcgccgtttggcggtgtgaaagagtccgggctg
ggccgcgaaggctcccaccacgggttggatgaatttactgaactgaaatacgtctgcgtt
ggcggtttataa
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