Halomonas sp. GFAJ-1: BB497_05775
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Entry
BB497_05775 CDS
T05375
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_05775
Enzymes [BR:
hag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BB497_05775
DNA repair and recombination proteins [BR:
hag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BB497_05775
Prokaryotic type
BB497_05775
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AVI62250
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Position
complement(1264870..1266450)
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AA seq
526 aa
AA seq
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MAQAPLQVVWFKRDLRIHDHAPLANAAAAGPVLPLFAIEPGQWQAPDSALRHWQFAADSL
VDLAQALNTLGLPLCLWQGDIVECLAALKAHYGELVLHSHQETGNAWSFERDQCVQAWCH
AHHVPWQEARQQGVIRGLSSRTEHQSRWESHWETLMAAPTCPAPPTAVAAPGWEAFHHVD
VAQLPSLTLGFDTTPCPQRQRGGRSEGRALWLSFITQRGRRYRGSLSKPLLAWEFGSRLS
PHLAWGTLSMREVVQSLRRQRQKHADDTDWARSLRAFTSRLYWHCHFIQKLESEPSIEHQ
TLHPALRGLRERDPEHPHLIAWKRGQTGVPLVDACMRSLTATGWINFRMRAMLLSHATFG
LGLHWYEPALHLAQLFTDFEPGIHYPQVQMQAGATGTNALRVYNPIKQAEDNDPTGEFIA
RWVPELAPLPQEWRAKPWTLPESLQKRFGFQPGIDYPIPNDFEAEARHWKQMLYELRRTP
EARGASKVIVDKLASQRRPAVRRGKKAQPANRQQLSLFDDDGSINN
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcaccccttcaggtcgtttggttcaaacgcgatttacgcattcacgatcac
gcaccgctggccaacgccgcagcggcaggcccagtgctgccgctatttgccatcgagcct
gggcagtggcaagcacccgacagcgccctgcgccactggcagtttgccgccgattcgctg
gtagaccttgcccaagcactcaacacgctgggcctgccgctctgcctgtggcagggcgat
atagtggaatgcctggccgcgctcaaagcccactacggcgaactggtgctgcactcccac
caagagaccggcaacgcctggagctttgagcgcgaccagtgcgttcaggcgtggtgccac
gcccaccacgtgccctggcaagaagctcgccagcagggcgtgattcgcgggctgagcagc
cgcacggagcatcaatcccgctgggaaagccactgggaaacgctgatggccgcccctacc
tgccccgccccgccaacagcggtggcggctcccggttgggaagcttttcatcacgtggat
gtagcccaactgccctcgctcaccttgggattcgataccacgccctgcccccagcgccag
cggggcgggcgcagtgaagggcgcgcgctgtggctgagctttattacccagcgcgggcgg
cgctatcgcggctcgctctctaaaccgttactggcttgggagtttggttcacggctctcc
ccgcacttggcctggggcacgctctccatgcgggaagtggtgcaatccctgcgccgccag
cggcaaaagcacgccgacgacaccgactgggctcgctcgctgcgcgcctttacctcgcgg
ctctactggcactgccactttatccagaagctggaaagcgaacccagcatcgagcatcaa
acgctgcacccggcgctgcgcggcctgcgggagcgcgacccagaacacccccacctgatc
gcctggaagcgcggccaaaccggcgtgccgctggtggatgcctgcatgcgcagcctgacc
gccaccggctggatcaactttcgcatgcgcgccatgctgctctcccacgccacctttggc
ctggggctgcactggtacgagccagcattacacttggcgcagctgtttaccgacttcgaa
cccggtattcactacccccaagtgcagatgcaggcaggcgccaccggcaccaacgccctg
cgggtttacaaccccatcaagcaagcagaagataacgaccccaccggcgaattcatcgcc
cgctgggtgccagagcttgcgccccttccccaggagtggcgcgccaagccttggacgctg
ccggaaagcctgcagaaacgtttcggctttcagcccggcatcgactatcccatccccaac
gatttcgaagccgaagcgcgccactggaagcagatgttgtatgaactgcgccgcacgccg
gaagcgaggggtgccagcaaggtcattgtggataagttggcgagtcagcggcgaccagct
gttcggcgtggcaaaaaagcgcaacccgccaatcgtcagcagctttcgctctttgatgat
gatggcagcatcaataattga
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