Halomonas sp. GFAJ-1: BB497_06260
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Entry
BB497_06260 CDS
T05375
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_06260
DNA repair and recombination proteins [BR:
hag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BB497_06260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_16
AAA
AAA_22
AAA_14
AAA_5
nSTAND3
SLFN-g3_helicase
Zeta_toxin
AAA_24
ABC_tran
NTPase_1
AAA_29
GvpD_P-loop
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AVI64281
UniProt:
H0J5P2
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All DBs
Position
1376687..1378057
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AA seq
456 aa
AA seq
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MAKAKSAFVCTECGAEYRKWQGQCNSCQEWNTLSEIRLASARPGSGAATGRSGYAGDLSR
DVVDLSNVDLSEVPRLSSTFAEFDRVLGGGLVPGSAVLLGGNPGAGKSTLLLQTACKLAQ
QRRILYVTGEESLSQVAMRAHRLQLPTSGLQMLAETSVETILAVADRENPEILVIDSIQT
MHLEDISSTPGGVAQVRESAAALTRFAKQTNTVLLLVGHVTKDGTLAGPKVLEHMIDASL
LLEGGADSRFRTLRGQKNRFGAVNELGVFAMLEQGLKEVKNPSAIFLSRPEQQAPGSLVM
VVWEGTRPILVEVQALVDESALGNPRRVAVGVDQNRLAMLLAVLNRHGGLFTGDQDVFLN
VVGGVKVLETSADLAVLLAVVSSLQNRALPKELVVFGEVGLSGEIRPVPSGQERISEAAK
HGFLRAIVPRANAPKQAPKGMEVIPVDKLSDALDAL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagcgaaaagtgcctttgtatgtaccgaatgcggtgctgagtatcgaaagtgg
cagggccaatgcaacagctgccaggagtggaatacgcttagcgagattcgtttggccagt
gcgcggcctggcagcggtgctgccaccggcaggagtggttacgcaggcgacttatcccgg
gacgtcgtagatctgagcaatgtagatctaagcgaagtgccacgcttgtcctcaaccttt
gccgagtttgatcgtgtcttgggcggtggtttggtgcctggctctgcagtactgctgggg
ggcaaccctggggcaggtaagtccacgctgctgcttcagacggcctgtaagctggctcag
cagcggcgtattttatatgtcactggtgaagagtcgctttctcaagttgccatgcgagca
caccgtctgcagttacccactagtgggctgcaaatgctggctgaaaccagcgtcgaaact
attttggccgtggcggatcgcgaaaatcctgagattttagtcatcgactctatccaaacg
atgcaccttgaagatatcagctcgacaccgggtggggtggctcaggtgcgtgagtctgcg
gctgccttgacgcgctttgccaagcaaaccaataccgtcctgctgctggtaggccatgtg
accaaagacggcactctcgcggggcctaaagtgcttgagcatatgattgatgcttcgcta
ctgcttgaaggcggtgccgactcacgctttcgtactctgcgtgggcaaaaaaaccgcttt
ggtgcggtgaatgagctaggcgtctttgcgatgctggagcaaggcttaaaagaggtgaaa
aaccccagcgcgatctttctttctcgcccggagcagcaagcgccaggtagcctggtgatg
gtggtttgggaaggcacacggcctattttggttgaggtacaggcattggtagacgagtct
gcactgggtaatcctcgccgcgtggcggtaggggtagatcaaaatcgcctagcaatgcta
ctggcggtgcttaatcgccatggcggactatttacgggcgaccaggatgtctttctcaat
gtcgtgggtggggtgaaggtacttgaaaccagtgctgaccttgcagtgctgctcgcagtg
gtctctagcctacaaaaccgcgccctgcccaaagagctggtggtatttggcgaagtgggt
ttgtcaggagagatccgccctgtgccaagcggccaagagcgtatttccgaggcggcaaag
cacggatttttacgcgctattgtgccccgggccaatgcgccaaaacaggctccaaagggg
atggaggttatcccggtcgataaattgagcgatgccctagacgcgctctag
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