KEGG   Halomonas sp. GFAJ-1: BB497_06260
Entry
BB497_06260       CDS       T05375                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
hag  Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:hag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hag03400]
    BB497_06260
DNA repair and recombination proteins [BR:hag03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BB497_06260
SSDB
Motif
Pfam: AAA_25 ATPase Zn_ribbon_LapB ChlI Lon_C DnaB_C AAA_16 AAA AAA_22 AAA_14 AAA_5 nSTAND3 SLFN-g3_helicase Zeta_toxin AAA_24 ABC_tran NTPase_1 AAA_29 GvpD_P-loop cobW Viral_helicase1
Other DBs
NCBI-ProteinID: AVI64281
UniProt: H0J5P2
LinkDB
Position
1376687..1378057
AA seq 456 aa
MAKAKSAFVCTECGAEYRKWQGQCNSCQEWNTLSEIRLASARPGSGAATGRSGYAGDLSR
DVVDLSNVDLSEVPRLSSTFAEFDRVLGGGLVPGSAVLLGGNPGAGKSTLLLQTACKLAQ
QRRILYVTGEESLSQVAMRAHRLQLPTSGLQMLAETSVETILAVADRENPEILVIDSIQT
MHLEDISSTPGGVAQVRESAAALTRFAKQTNTVLLLVGHVTKDGTLAGPKVLEHMIDASL
LLEGGADSRFRTLRGQKNRFGAVNELGVFAMLEQGLKEVKNPSAIFLSRPEQQAPGSLVM
VVWEGTRPILVEVQALVDESALGNPRRVAVGVDQNRLAMLLAVLNRHGGLFTGDQDVFLN
VVGGVKVLETSADLAVLLAVVSSLQNRALPKELVVFGEVGLSGEIRPVPSGQERISEAAK
HGFLRAIVPRANAPKQAPKGMEVIPVDKLSDALDAL
NT seq 1371 nt   +upstreamnt  +downstreamnt
gtggcgaaagcgaaaagtgcctttgtatgtaccgaatgcggtgctgagtatcgaaagtgg
cagggccaatgcaacagctgccaggagtggaatacgcttagcgagattcgtttggccagt
gcgcggcctggcagcggtgctgccaccggcaggagtggttacgcaggcgacttatcccgg
gacgtcgtagatctgagcaatgtagatctaagcgaagtgccacgcttgtcctcaaccttt
gccgagtttgatcgtgtcttgggcggtggtttggtgcctggctctgcagtactgctgggg
ggcaaccctggggcaggtaagtccacgctgctgcttcagacggcctgtaagctggctcag
cagcggcgtattttatatgtcactggtgaagagtcgctttctcaagttgccatgcgagca
caccgtctgcagttacccactagtgggctgcaaatgctggctgaaaccagcgtcgaaact
attttggccgtggcggatcgcgaaaatcctgagattttagtcatcgactctatccaaacg
atgcaccttgaagatatcagctcgacaccgggtggggtggctcaggtgcgtgagtctgcg
gctgccttgacgcgctttgccaagcaaaccaataccgtcctgctgctggtaggccatgtg
accaaagacggcactctcgcggggcctaaagtgcttgagcatatgattgatgcttcgcta
ctgcttgaaggcggtgccgactcacgctttcgtactctgcgtgggcaaaaaaaccgcttt
ggtgcggtgaatgagctaggcgtctttgcgatgctggagcaaggcttaaaagaggtgaaa
aaccccagcgcgatctttctttctcgcccggagcagcaagcgccaggtagcctggtgatg
gtggtttgggaaggcacacggcctattttggttgaggtacaggcattggtagacgagtct
gcactgggtaatcctcgccgcgtggcggtaggggtagatcaaaatcgcctagcaatgcta
ctggcggtgcttaatcgccatggcggactatttacgggcgaccaggatgtctttctcaat
gtcgtgggtggggtgaaggtacttgaaaccagtgctgaccttgcagtgctgctcgcagtg
gtctctagcctacaaaaccgcgccctgcccaaagagctggtggtatttggcgaagtgggt
ttgtcaggagagatccgccctgtgccaagcggccaagagcgtatttccgaggcggcaaag
cacggatttttacgcgctattgtgccccgggccaatgcgccaaaacaggctccaaagggg
atggaggttatcccggtcgataaattgagcgatgccctagacgcgctctag

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