Halomonas sp. GFAJ-1: BB497_06880
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Entry
BB497_06880 CDS
T05375
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hag
Halomonas sp. GFAJ-1
Pathway
hag03030
DNA replication
hag03430
Mismatch repair
hag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB497_06880
03430 Mismatch repair
BB497_06880
03440 Homologous recombination
BB497_06880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hag03032
]
BB497_06880
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_06880
Enzymes [BR:
hag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BB497_06880
DNA replication proteins [BR:
hag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BB497_06880
DNA repair and recombination proteins [BR:
hag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BB497_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AVI64287
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Position
1513063..1513713
Genome browser
AA seq
216 aa
AA seq
DB search
MRWLDRHVSLFSGSLRTLLQRESDRRRCVGSPYAWLFQPYMGEEQVALACYASAGEHPVI
SVAAVVLSQRHVQTSRAWVATIANTRSANAATLRRHQHVYGTTVALSPNAENLGALAEFI
GNRPLIGWQIDRSLDQLNMQFKEALGFGLPNAQVDVAKLHHRQLRRLHPQVDIGNDLGEA
LERWQLPAMNSHGVLSEAAASALLYIRLQRETAQVA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcgatggttagatcgacacgtgtcgctattcagcggctccctgcgcaccctcctgcag
cgagaaagcgaccgccgccggtgtgttggctctccctatgcatggctattccagccctat
atgggggaagagcaggtggcccttgcgtgttatgcgtctgcaggtgagcacccggtgatt
agtgtggcagcagtggtgctgagccagcgccatgttcaaaccagcagagcctgggttgcc
acgatagcgaacacccgtagcgcaaatgccgctacgcttaggcgccatcaacacgtttat
ggtacgaccgtcgctttatcgcccaatgcagagaatctcggggcactggctgagtttatt
ggcaaccggcccttaataggctggcaaatagaccgctctcttgatcagctaaatatgcag
ttcaaggaggcgcttggcttcggtttgcccaatgcgcaggtggatgtcgccaagcttcat
catcgccagctgcgacgtttacacccccaggtagatatcggcaacgacttgggcgaggcg
ctagagcgatggcaactgcccgcaatgaacagccacggggtgctaagtgaagctgctgcg
agtgcgctgctgtatatccgtttgcagcgtgagactgcccaggtggcttaa
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