Halomonas sp. GFAJ-1: BB497_07890
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Entry
BB497_07890 CDS
T05375
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_07890
DNA repair and recombination proteins [BR:
hag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BB497_07890
Archaeal homologous recombinant proteins
BB497_07890
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AVI64298
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Position
1725503..1726651
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AA seq
382 aa
AA seq
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MRLLHTADWHLGRLFHNLSLLEDQRHVLNQLIEIIDRDAVDAVLIAGDIYDRSVPPAAAV
TLLDDILGELCEKRGLPVIMISGNHDGAERLGFGARHLRQAGLHILSDLAACDRPVTLSI
NGVDVDVFGIPYADPEYVRSQFSADVRDFDSAHRYLIERIEAKRQAGRPAVLMSHCFVDG
GSASDSERPLTLGGAESVAWEPMQAFDYVALGHLHGPQYRGGEHIRYSGSLLKYSFSEAN
QRKGVTLVDIGTEGVSQIEHRPLTPRREVRVLEGELDALLAQGRTDAQADDYLLVRLTDR
HAILDPMGKLREVYPNVLHLEKPGMLEAQGRQQLDRERLQFSALDMFSDFFSQTSGEKMS
EEQASAMRELITTLSREQEEKP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcgactacttcataccgccgattggcacctggggcggctgtttcacaacctctcgcta
ctggaagaccaacgtcatgtgctgaatcagctcattgagattatcgaccgcgatgcggtg
gacgctgtgctgattgccggtgatatctacgaccgctctgtgccacccgccgccgccgtc
acgctattagatgacatccttggcgaactgtgtgaaaagcgcggtttgccggtaattatg
atctccggcaaccacgacggcgcggagcgcctgggcttcggcgcgcgccacctgcgccag
gctggcctacatattttgtctgatttagctgcctgtgatcgccccgtaacactgtcgatt
aacggggtagacgtggatgtgttcggtattccctacgctgatccagagtatgtgcgcagc
cagttttcagccgatgtacgtgactttgatagcgctcaccgctacttgatagagcgtatt
gaggcaaagcgtcaagcaggccgccccgccgtactgatgagccactgctttgtggatggt
ggtagcgccagtgattccgagcggccgttgaccctaggcggcgcagagagcgtggcgtgg
gagccaatgcaagcgtttgactatgtcgccttaggccaccttcacgggccgcaatatcgc
ggcggtgaacatattcgctacagcggctcgctgcttaaatacagcttttctgaagctaat
cagcgcaagggcgttaccctggtggatattggcaccgagggcgtgagccagattgaacac
cgcccgctgacaccacgccgagaagtacgtgtgttggaaggtgaactggacgcgctgtta
gcacaggggagaaccgacgcccaagccgatgactacctgttagtgcggctgaccgaccgc
cacgcgattcttgaccccatgggcaagctacgcgaggtctaccccaacgtgctgcattta
gaaaagcccggcatgttggaagcccaagggcgtcagcaattagaccgtgagcggctgcag
tttagtgccctggatatgtttagcgatttcttcagccaaaccagcggtgaaaaaatgagc
gaggagcaggccagcgccatgcgtgaactcatcaccacgttaagccgcgagcaggaggag
aagccatga
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