Halomonas sp. GFAJ-1: BB497_07895
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Entry
BB497_07895 CDS
T05375
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_07895
DNA repair and recombination proteins [BR:
hag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BB497_07895
Archaeal homologous recombinant proteins
BB497_07895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AVI62633
UniProt:
H0J5L3
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All DBs
Position
1726648..1729719
Genome browser
AA seq
1023 aa
AA seq
DB search
MTPLTLTMQAFGPFAGSETIDFTALGKSPLFLINGPTGAGKSSILDAICFALYGQTTGND
RDAGQMRCDQAADALLTEVSLDFRLRDGAYRVRRVPQQERPKATGEGTTTQSAEAQLWRL
TPEGEENECLVARKVTDANSQLHALIGLDANQFRQVMVLPQGKFRELLLAESKDREKIFS
QLFQTHIFQRIEERLRTQANQIERAVSDHRQHISGILAGGELESEAALAQELSALTPQVG
QARQCFETAQRQRRSAEQRRDEALTLQRQFDARDSLAADKARHLEQQAQITDFQSRLTQS
DHAQALRPHSTALAQAQQALSTAQTEQQQADAALTTQLASTEQAKHTFETARQHQTELPA
LRERHRQLGEFIQKGQQLSELEARCQTAQAAWQQADDHLKRDEARLDSIRQQGEAISLTL
ESLQAEGQQLASAPAELSRHENLLTQRQALDDLIRQGRELTAHQQQATEALNRRRSDAEQ
AKRHATEQEMHWHQGQAALLALSLEEDAPCPVCGSLEHPAPAVKHADIVTQAQVETARSS
QEQARHASETAGRQVQQLAQQISYNAEQTQRLSQQLGEWASQPQAALQQACEQLRREVER
RTCVEDEITQLSSAREALRRDWGALDKQLKAQRPMVEKAKEEALRLESQRDQLSQSLPED
ARNPLAMRQTLTELDSQIAAFEKAWEAAQQTLSASQTQQARAEEQLRGANQRVAHCQQAL
EQAQAEWQTALQGSSFESEAAFQAAQLEDSQRQELTRQVEAYQRRLAELEGALHNYHAQL
AEKTPPDLATLTTLTEAAQAEEHTQLETWRALDGRLKTLQGIRQKLTAAHAAQAELEAQY
RVWGTLSEVANGRTGHRISLQRFVLGVLLDDVLIQASERLVRMSRGRYQLVRREDPSKGN
KASGLELDVADTYTGKSRSVATLSGGESFMAALSLALGLSDVVQAYAGGIQLDALFIDEG
FGSLDQDALDQAIAMLSELQMGGRMIGVISHVSELKEQMPVRVEVRASRHGSLVEVKGAL
RSA
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgttaacgctcaccatgcaggcgtttggcccctttgcaggcagcgaaacgatt
gacttcacggcgctgggcaaaagcccgctgtttttgattaacggccccacgggtgccggg
aaaagctcgatattagatgccatctgctttgcgctttacggccaaaccaccggtaatgac
cgcgatgccgggcagatgcgttgcgaccaggctgctgatgcgttgttgacggaggtcagc
ttggattttcgcctgcgtgatggggcttaccgagtgcgccgggtgccccagcaagagcgc
cccaaggccactggcgaaggcacgaccacgcaaagcgctgaagcccagctgtggcggctg
actccggaaggcgaagaaaatgaatgtttggtggcgcgtaaggtcaccgatgccaacagc
cagttgcacgctttaattggcctggatgctaatcaatttcggcaagtgatggtgctgccc
cagggtaagttccgcgagctgttgttggcagaatcaaaagaccgcgagaaaatcttttcg
cagctgtttcaaacacacatttttcagcgcattgaagagcgcctgcgtacccaggcaaac
caaattgagcgggcggtgagtgaccatcgccagcatattagcggcattttggccggtggc
gagctggaaagcgaggcggcgttagcgcaagagttatcggcgctaaccccgcaagtaggg
caggcgcgccagtgctttgaaactgctcagcggcagcggcgcagcgctgagcagcggcga
gacgaggccctaacgctgcagcgtcaatttgacgcccgcgacagcctcgccgcggataaa
gcacgccaccttgagcagcaagcgcaaataacggatttccaaagccgcttgacccaaagc
gaccacgcccaagcgctgcggccccacagcactgcgttagcccaagcgcaacaggcgctg
agtaccgcccaaacagaacagcagcaggccgatgccgcactcaccactcagcttgccagc
actgagcaagccaagcacacctttgagacagcgcgccagcaccaaacggaactgcccgcg
ctacgtgagcgccatcgacagttgggcgagtttatccaaaaaggccagcagttaagcgag
cttgaagcacgctgccaaacggcccaggccgcttggcagcaagccgatgaccacctaaag
cgcgatgaagcgcggttagacagcattcgccagcaaggtgaggccattagcctcactctt
gagagcctgcaagcggagggtcagcagttggccagcgcccccgcggagttaagccgccat
gagaacctgctaactcagcgacaagcgttggatgatcttattcggcaggggcgtgaactc
actgctcaccaacagcaggcaacagaggcgctcaaccgccgacgcagcgacgcagagcag
gccaagcggcacgcgacggagcaagagatgcactggcatcaggggcaagccgcactgcta
gcgctttcccttgaggaggacgcaccttgcccggtgtgcggcagtcttgagcacccggcc
ccggcggttaaacatgcggacatcgttacccaagcccaggtggaaaccgcccgctcatcc
caggagcaagcccgtcacgcatcagaaaccgccgggcgtcaggtccagcagttagcacaa
cagataagttacaacgctgagcagacgcagcgccttagtcaacagctaggcgagtgggcc
agccagccccaggctgcgttacagcaggcctgcgaacaattacgccgcgaagttgagcgt
cgcacctgtgtcgaggatgagattacccagctaagcagtgctcgagaagcgttacgccgt
gactggggcgcgctggataaacagctcaaagctcagcggcctatggttgaaaaggccaaa
gaagaggcgttacggctagagagccagcgcgatcaattaagtcaatcgctgcctgaagat
gcccgtaacccgttagctatgcgccaaacgctcacggagctggatagccagattgctgcg
ttcgaaaaagcctgggaggctgctcagcagacgctttcggctagccaaacccagcaggcg
cgggcagaagagcaactgcgaggcgcgaatcagcgggtagcgcactgccagcaagccctt
gaacaggcgcaggctgagtggcaaacggcactacagggcagttcgtttgaaagtgaagct
gcctttcaggcggctcagttagaggatagtcaacggcaagagctaacgcgccaagtagag
gcgtatcagcggcgtctagccgagcttgagggcgcgctacacaactaccatgcccagctt
gcggaaaaaacgccgccagatctcgccacacttaccacgctcacggaagctgcccaagct
gaggagcatacccagctagagacgtggcgggcgttggatgggcggttaaagaccctgcag
gggattcgtcaaaagctcaccgccgcccacgcggcccaggccgagcttgaagcccagtat
cgggtgtggggaacgctcagcgaggtagccaacggtcgaactggtcatcgcattagcttg
cagcggtttgtgctgggcgtgctgttggacgacgtactgattcaggcgtctgaacggctg
gtgcgtatgagccgagggcgctatcagttggtgcgccgcgaagacccttcaaaaggcaat
aaagcgtcaggattggagctggacgtagccgacacctacaccggcaagagtcgttcggta
gcgacgctctccggcggtgagtcttttatggcagcgctttcgctagcactggggctttcc
gacgtggtgcaggcctacgcgggtggtattcagctggatgcgctatttattgatgaaggc
tttggcagcctggaccaggatgcactagatcaagccattgccatgctcagcgagctgcaa
atgggcggtcgtatgattggggttatctcccatgtcagcgaactcaaagaacaaatgcca
gtccgtgtcgaagtacgcgccagccgacacgggagcttggtagaagtaaaaggcgcatta
cgcagtgcctag
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