Halomonas sp. GFAJ-1: BB497_09040
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Entry
BB497_09040 CDS
T05375
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hag03016
]
BB497_09040
Enzymes [BR:
hag01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BB497_09040
Transfer RNA biogenesis [BR:
hag03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BB497_09040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AVI62836
UniProt:
H0IZQ6
LinkDB
All DBs
Position
complement(1970216..1971559)
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AA seq
447 aa
AA seq
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MAKKLFIKTHGCQMNEYDSSRMADMLGESHQLELTDNEKEADVILLNTCSIREKAQDKVY
HQLGRWKKLKDANPDLVIGVGGCVASQEGEALRKRAPFVDMIFGPQTLHRVPKMLDARNN
NQIAAVDVTFPEIEKFDHLPQPTSDGATAFVSIMEGCSKYCTFCVVPYTRGEEVSRPFEA
VMDEVIHLADQGVREVNLLGQNVNAYRGDNEDGDEIDLAELIACVAAVDGIDRIRFTTSH
PVEFTDSLVDAFADIPELVSHLHLPVQSGSDRILSAMKRGHTAEEYIEKMERIRANRPDI
SFSSDFIIGFPGETEEDFEATMDLIHRIGFDHSFSFVYSARPGTPASGLPDETPESVKKQ
RLAILQERILQQTAQISRRMVGTTQRVLVSGFSPRDPGQLSGRTENNRVVNFRAANPTEL
IGYFVDVEITEALPNSLRGELASDERY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagctttttatcaaaacgcacggctgccaaatgaacgagtacgactcctcc
cgtatggcggatatgctcggcgaatctcatcagctggaattgaccgataacgagaaagaa
gcagacgtgattctgctgaacacctgctcgattcgcgaaaaggctcaagataaggtctac
caccaactgggtcgctggaaaaagcttaaagacgccaacccagacctagtgattggcgta
ggcggctgcgtggctagccaagaaggtgaagcgctgcgtaagcgggccccctttgtggac
atgatattcggcccacaaacgctacaccgcgtgcccaagatgctggacgcccgcaacaat
aaccaaattgctgcagtggacgttaccttccctgaaatcgaaaaatttgatcacctgcct
cagccaacatccgacggcgcgacggcatttgtttcgatcatggaaggctgctcgaaatac
tgcaccttctgtgtagtgccctacacccgcggtgaagaggtctctcgccccttcgaggcc
gtgatggacgaggtgattcacttagccgaccaaggcgtgcgagaggtcaacctgttgggc
caaaacgttaacgcctaccgcggcgataacgaggatggcgatgagattgaccttgccgag
ctgatcgcctgtgtcgccgccgtcgatggcatcgaccgtatccgctttacaacttcgcac
ccagtggagttcaccgacagcttggtcgacgcctttgccgatattccagagctggtcagc
cacctgcaccttcccgtgcagtctggctctgaccgcatcttgagtgctatgaagcggggc
cacaccgccgaagagtacattgagaaaatggagcgcatccgcgctaatcgcccggatatt
agtttctcctctgactttattattggcttccctggcgagaccgaagaggatttcgaagca
acgatggatctgattcatcgcattggctttgaccactccttcagctttgtttactcagcg
cgcccaggtacgcccgcttctggcctgccggatgaaacgccagaaagcgttaaaaagcag
cgactcgccattttgcaggaacgaattctgcagcagactgctcagatcagccgccgcatg
gtcggcactactcagcgagtattggtctccggcttctcaccaagagaccctggccaactc
tcgggccgtaccgaaaataaccgcgtggttaactttcgcgcggccaaccctacggagctt
attggctactttgtggacgtggaaatcaccgaagcactgcccaattcactgcgtggtgag
cttgcttctgacgagcgttattaa
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