Halomonas sp. GFAJ-1: BB497_10885
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Entry
BB497_10885 CDS
T05375
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hag
Halomonas sp. GFAJ-1
Pathway
hag03030
DNA replication
hag03430
Mismatch repair
hag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB497_10885
03430 Mismatch repair
BB497_10885
03440 Homologous recombination
BB497_10885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hag03032
]
BB497_10885
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_10885
Enzymes [BR:
hag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BB497_10885
DNA replication proteins [BR:
hag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BB497_10885
DNA repair and recombination proteins [BR:
hag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BB497_10885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
nSTAND3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AVI63162
LinkDB
All DBs
Position
2420634..2421617
Genome browser
AA seq
327 aa
AA seq
DB search
MALTDVLPWHYDTWKQFVRLANDDRMPHALLISGAHGVGKQQLADALVAKTLCAKPTEQA
CGQCHSCAMLASGYHPDLLRISPEEGKRQIRIDPIRDVNRFVSQTAQQGGYRVIVISPAE
AMNTAAANALLKSLEEPGEKTLFILLSDVPSRTLPTIRSRCQQWPLASVPFEACQGWLTE
KLGSDEALFWWRVSGGLPLLAIELAMPDERALRHQIHDCFEQLVRGAEPVSEAARLDRQA
IDAILWYGIAWLEDLIRLGLSGETTALHNPDLEPLYRQAVKNARVQDWFRLLDYAREQRR
LLAVGANPNPQLVLEAWLVRWSALLRS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaacggatgtgctgccctggcactatgacacctggaagcagttcgttcgctta
gcgaatgatgatcgtatgccccatgcattgcttatcagtggtgcacatggcgtcgggaaa
cagcagctagcggacgccttagtggcgaaaacactctgcgcaaagccgacagaacaagcc
tgcggccagtgccatagctgtgccatgctcgcctcgggctatcatcctgacttgctgcgc
atctctcctgaagagggtaagcggcagattcggattgatccgatacgtgatgttaatcgc
tttgtgtcacaaaccgcacagcagggcggttaccgggtgattgtcatatcccccgctgaa
gcgatgaacactgcagcggccaacgccttacttaaaagtttggaagagccgggtgaaaaa
acgctgtttattttgctctcggacgtaccctcgcggacgctgcctactatccgttcccgg
tgtcagcagtggccgttggcaagtgtgccttttgaggcgtgccaaggctggttgaccgag
aagctgggaagcgacgaagcgctcttttggtggcgagtatctggagggttgccactgttg
gctatagagttggcaatgcctgatgaaagggcattgcgccaccaaattcacgactgcttt
gagcagttggtgcgcggcgcagaacccgtttccgaggcagcaaggctcgatcgccaagcg
atagatgccatcctatggtacggtattgcatggcttgaagatctcattcgattaggccta
tcaggcgaaaccacagcgctgcataaccctgatttagagccgctttatcgccaagcggtt
aaaaacgcccgtgtacaagactggtttcggctattggattatgcccgcgagcagcgccgc
ctgctggctgtgggcgccaaccctaacccacagctcgtccttgaagcatggctggtgcgt
tggtcggcgctgttgcgctcataa
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