Halomonas sp. GFAJ-1: BB497_11070
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Entry
BB497_11070 CDS
T05375
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hag
Halomonas sp. GFAJ-1
Pathway
hag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BB497_11070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_11070
DNA repair and recombination proteins [BR:
hag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BB497_11070
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BB497_11070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AVI63196
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All DBs
Position
2460230..2460922
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AA seq
230 aa
AA seq
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MSAEPAFLLHRRAYRETSALVDLLTLNHGRIRAVAHGGQRPGSKSRQRLQPFTPLFVAWR
GEQELKRLTLMESRGQTALLAGEGLLCGLYANEIATRLLPLELSAQEVFAYYSALLEALP
TPAERALGLRRFEWSLLEVLEATPRFCSPEGHPLDPQTRYRFDALSRAFQPAEKGIEGRT
LRYIEQGDWQSTGLASALKAVMRAALAPHLGATALRSRELMLDLARRRQR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggagcccgcgtttttactgcaccgcagggcttaccgtgaaaccagtgcgctg
gtggatcttttaacgcttaatcacgggcgtatccgcgctgttgcccacggagggcagcgg
cccggctctaaatctcgccagcgtctgcagccgtttacgccgctattcgtggcttggcgg
ggtgagcaggagcttaaacggttaaccctgatggagtcccgtgggcaaacagcgctgcta
gcaggcgaagggctgctttgcggcctctatgccaatgagattgcgacacggctactcccc
ctggagttaagcgcccaagaagtctttgcctactacagtgctttgttagaagcgctgcct
acgcccgccgagcgtgcccttggtttgcgtaggtttgagtggtcgctgcttgaggtttta
gaggcgacgccgcgtttttgttcgccggaaggtcatccgctggacccacaaacccgctac
cgctttgatgcgttaagccgtgcttttcaacctgctgagaaggggattgaaggtcgcaca
ctgcgttatattgagcagggcgattggcagtcaacagggttagccagcgctttaaaagcg
gtaatgcgggcagcgcttgcgcctcatttgggtgcaactgcactgcgctcaagagagctg
atgctcgatctagcccgccgtcgacagcgttaa
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