Halomonas sp. GFAJ-1: BB497_12025
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Entry
BB497_12025 CDS
T05375
Name
(GenBank) recombination-associated protein RdgC
KO
K03554
recombination associated protein RdgC
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_12025
DNA repair and recombination proteins [BR:
hag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BB497_12025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
DUF5666
Motif
Other DBs
NCBI-ProteinID:
AVI63373
UniProt:
H0IXR5
LinkDB
All DBs
Position
complement(2683315..2684253)
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AA seq
312 aa
AA seq
DB search
MWFKHLHLYRLHGAPELDSSALASALDTHAAKPLGNADARRLGWTAPAGRLSGGQLLHEI
QGHRLISALRQERLLPASVVKEEVDEKVADIEASEGRKVTRKEKTALKEQVTEALLPRAF
VRSQKVDVWWDTRRHLIGINASSRTRAEDILDLLRETLGSLKATPISSQTLPIRAMTTWL
GDPASRPSDLKLGDQVELKAKGDDGVLRARQVDLDSDEIQQLLESGRQASKLAISLEGRL
SFVLHDDLALKSLRFGDALIEEADHADDGDDALARLETDFILMAQALSDDVTRLLEWLGG
ETQREPAAQQEA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttaagcacctgcatttatatcgccttcatggcgcccctgagctagacagttca
gcattagcaagcgcactcgatacccatgcagccaagcctcttggaaatgccgatgcacgg
cgccttggctggacagcgcccgcaggccgcttaagcggaggacaattactgcatgaaatc
caggggcatcggctgatctcagcgctgcgtcaggagcgtttactgccggcttcagtggtt
aaagaagaagtcgacgaaaaagtcgcggatattgaggccagcgaaggtcgcaaagtcacg
cgcaaagaaaaaaccgcgttaaaagagcaagttacagaagcattactgccgcgtgctttt
gtacgcagccagaaagtcgacgtgtggtgggatacccgccgccacctgatcggtattaat
gccagctcacgtacccgcgcagaagatatcttagacctactccgtgaaacccttggcagt
ttaaaggccacgccaatctcctcccaaacgctgcccatccgtgccatgaccacatggctt
ggcgaccctgccagccgcccatcggatcttaagctgggcgatcaagtggagctgaaagcc
aaaggcgatgacggcgttttgcgggcaaggcaagtagacttagacagcgacgagattcaa
caactgctcgaaagtggtcgccaagcaagtaaactcgctattagcctggagggtcgctta
agctttgtactccacgacgatttagcacttaaatcgctgcgttttggcgacgcgctaatc
gaggaggctgaccatgccgatgatggcgacgacgccctggcacgcctggaaaccgacttt
attttaatggcacaggcgctatccgacgacgtcacccgtttattggagtggctcggaggt
gaaacacagcgggaacctgccgcgcagcaagaagcctaa
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