Halomonas sp. GFAJ-1: BB497_12060
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Entry
BB497_12060 CDS
T05375
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hag
Halomonas sp. GFAJ-1
Pathway
hag03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
BB497_12060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hag03011
]
BB497_12060
Ribosome [BR:
hag03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
BB497_12060
Bacteria
BB497_12060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
PCB_OB
S1_2
Motif
Other DBs
NCBI-ProteinID:
AVI63380
UniProt:
H0IXS2
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Position
2693089..2694768
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AA seq
559 aa
AA seq
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MSESFAELFEQSLNDINMEPGAIVAAQVVDIDGDWVTVNAGLKSEGQIPASQFRDENGEL
NIAIGDDVHVALEAVEDGFGETRLSREKAKRAEAWKVLEAAFEKDEVIKGVINGKVKGGF
TVEVDSIRAFLPGSLVDVRPVRDTAHLENKELDFKVIKLDPKRNNVVVSRRAVLEAENSA
EREALLATLQEGQQIKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVAVGDE
INVKVLKFDRERNRVSLGLKQLGEDPWVNIKQRYPENTKVQAVVTNLTDYGCFAELEEGV
EGLVHVSEMDWTNKNIHPSKVVQVGDDVDVMVLDIDEERRRISLGIKQCTANPWETFNAE
YNKGDRVSGTIKSITDFGIFIGLEGGIDGLVHLSDISWTETGEEAVRNFKKGDEAEAVIL
SIDPERERISLGIKQMDSDPVAEYLSVNDKGSIVTGRIVEVDAKEAHVELATDVIAILKA
SEISADRVEDARNVLNEGDSVEARIVNVDRKSRQINLSIKAKEQDDTRQNLKKLRDQEPE
SAGGPTTIGDLIKQQMGQD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgctgaactgtttgaacagtctcttaacgacatcaatatggagcca
ggcgctattgtcgcggctcaagttgtcgacatcgatggtgactgggttaccgtcaacgct
ggtctaaaatctgaaggtcagattccggcgtcacaattccgcgatgaaaacggtgaactg
aacatcgctatcggcgacgacgttcacgttgcattggaagccgttgaagatggcttcggt
gagacgcgtctgtcccgtgagaaagccaagcgcgcagaagcttggaaggttctggaagct
gccttcgagaaagacgaagtcatcaaaggcgtgatcaacggcaaagtcaaaggcggcttc
accgtcgaagttgattctattcgtgccttcttgccgggttctctggttgacgttcgcccg
gttcgcgacactgcgcacctggaaaacaaagagctggactttaaagtcatcaagcttgat
ccgaagcgcaacaacgtcgttgtatcgcgtcgtgccgtgcttgaagcagagaacagtgcc
gagcgcgaagcgctgctggcaactctgcaggaaggtcagcagattaaaggtatcgttaag
aacctgactgactacggtgccttcgttgacctaggcggtgttgatggcctgttgcacatc
accgatatggcgtggaagcgcatcaagcatccgtctgaaatcgttgctgttggcgacgag
atcaacgttaaagtgctgaaatttgatcgtgagcgtaaccgcgtttcactaggtctgaag
cagcttggcgaagatccgtgggtcaacatcaagcagcgctatccggagaacaccaaagtt
caagccgtggtcactaacctgaccgattacggctgctttgcagagctggaagaaggcgtt
gaaggtctggttcacgtttctgaaatggactggactaacaaaaacatccatccgtctaaa
gttgttcaagtgggcgacgatgttgacgttatggttctggatatcgatgaagagcgtcgt
cgtatttctctgggtattaagcagtgcactgctaacccatgggaaaccttcaacgctgaa
tacaacaagggcgaccgcgtttcgggtaccatcaagtcaatcaccgactttggtatcttt
atcggccttgaaggcggtatcgatggtctggttcacctgtccgatatctcctggacagaa
actggcgaagaagcagtacgcaacttcaagaaaggcgacgaagctgaagccgtcatcctt
tctatcgatccagagcgcgagcgtatttctttaggtattaagcaaatggattctgatccg
gttgctgaatatctgtctgttaacgacaagggcagcattgtgactggccgtatcgttgaa
gttgacgctaaagaagctcacgttgaactggcgacagatgttatcgctattttgaaggcg
tctgagatcagtgctgatcgtgtggaagatgcgcgtaacgtattgaacgaaggcgacagc
gttgaagcgcgtattgttaacgtcgatcgtaagagtcgtcagatcaatctgtcgattaag
gcgaaagagcaagacgatactcgtcagaacctgaagaaactgcgtgatcaagagcccgaa
tcagcaggtggtccgaccactatcggtgaccttatcaagcagcagatgggtcaagactaa
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