Halomonas sp. GFAJ-1: BB497_12100
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Entry
BB497_12100 CDS
T05375
Name
(GenBank) type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hag02044
]
BB497_12100
02035 Bacterial motility proteins [BR:
hag02035
]
BB497_12100
Secretion system [BR:
hag02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
BB497_12100
Bacterial motility proteins [BR:
hag02035
]
Pilus system
Pilus assembly proteins
BB497_12100
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF6267
YscO
Snapin_Pallidin
Motif
Other DBs
NCBI-ProteinID:
AVI63388
LinkDB
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Position
complement(2699808..2701037)
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AA seq
409 aa
AA seq
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MAKVKARQTKRAPLYRWKWAGTGPQDRPMRGELIGRTKTDIVEQLAKQRIIATKIQKRSS
FSGRGKVTNVDIMVFARQMATMVRAGIPILQALQAVSESLKKPAMVALTQQIMEDVSSGD
SLSSAMAKHPKQFDRLFVNLVDAGEQAGALDQMLERIASYKEKVESLKNRVKKALWYPTA
VMAIGVAVTMLLLIKVVPEFESMFQGFGAELPALTQFTVNLSELAQRYWLYALGMLVGGV
MLLKAAARRSYALAYRLDGLMLRLPVIGDIMNKSAVSRFTRTLATTFASGVPLVEGLETA
AGAADNRVYSKAINEVRQDVTTGQQLHFAMRMTNRFPALAVQMVSIGEEAGSLDAMLNRV
ADYYEEEVENKVDALTSLMEPVIIVVLGTLVGGVVVSMYLPIFEIGTAL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtaaaagcacgccaaacaaagcgggcgccactttatcgctggaaatgggca
ggcacaggcccacaggataggccgatgcgcggggagctcattggccgtacaaaaactgat
attgttgagcaactggctaaacaacgtattatcgccactaaaatccaaaaacgcagcagt
tttagtgggcgtggcaaagttaccaacgtcgatattatggtctttgcccgacagatggcc
accatggtgcgtgcaggcatccccattctacaagcgctccaggcagtgtctgaaagcctt
aaaaagcctgctatggtggcgcttacccagcaaatcatggaagacgtttcctcgggcgat
agcctctcaagcgcaatggccaaacaccctaagcagtttgaccggctgtttgtaaacctc
gtggatgctggcgaacaagcgggcgcactggatcaaatgctggagcgtattgccagctat
aaagagaaagtagaatcacttaaaaaccgggttaaaaaagccctttggtaccccaccgcc
gtcatggccattggtgtcgctgttaccatgctgctactgattaaagtcgtgccagaattt
gaaagcatgttccagggatttggcgccgagctacccgcacttacccagttcacggtgaat
ttatccgaattagcgcagcgatattggctctatgcactaggtatgctagtgggtggcgtc
atgcttcttaaagccgccgcaaggcgctcttacgccctagcctatcgactagatggcttg
atgctgagacttcctgtgataggcgatattatgaacaaatctgccgtttcccggttcacc
cgcaccctggccacgacgttcgcctcaggcgtgccgctggtggaagggcttgaaaccgcc
gcaggggctgcagacaaccgcgtgtatagcaaagcgattaacgaagtacgccaagatgtg
actaccggccaacagctccattttgccatgcgtatgaccaaccgattccccgccctcgcg
gttcagatggtcagtatcggggaagaagccggctctttagatgccatgcttaaccgtgtt
gctgactattacgaagaagaagtcgaaaacaaagtggatgcgctaacctcgctcatggag
cccgttattattgttgtgctgggtacgttagtcggtggcgtagtcgtatccatgtacctg
ccaatttttgagatcggcaccgccctttaa
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