Halomonas sp. GFAJ-1: BB497_12190
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Entry
BB497_12190 CDS
T05375
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hag03000
]
BB497_12190
Transcription factors [BR:
hag03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BB497_12190
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AVI63404
UniProt:
H0IXU7
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Position
complement(2719596..2720492)
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AA seq
298 aa
AA seq
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MTAKQLRAFLAVAQTLSFTHACERLHLSQPALSLAIKGLEDSLGGKLLIRSTRSVRLTPE
GESLLPLAKHLLAQWDNTEERLRQRFTLQLGRLSVAAMPSFACNLLPGALVKFRQQYPKI
NITVHDVINEEVIDMVRSRQVEIGIAFSPEGTGSLTFTPLFEDEFVAVVPPTFPLHASSL
SWATLLQDDFITLQRPSMVRRLLELELGKRKIDLPVAFESHQLSTVGRMVAEGLGVSAVP
SMCIRQMQALGARCVPLNSPSIACRVGIITQQELSVAAYALRNVLVESVKAPCLAETF
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaaacaactgcgcgcctttctcgcggtcgcccaaaccctgagctttacccat
gcatgtgagcgcctgcacctttcacaaccagcattgagcctcgctatcaaagggttagag
gattcgcttggcggtaaattactcatccgaagcacccgtagcgtgcggctgacccctgaa
ggagagtcgttactcccccttgctaaacacctgctagcgcagtgggataacaccgaggag
cgcttgcgccagcgatttacacttcaattgggccgtttgagtgttgccgccatgccatct
tttgcctgcaacttactgcccggcgcgctggttaaatttcgtcaacaataccccaaaatc
aacatcaccgttcacgatgtgattaacgaagaggtgatcgacatggtgcgctcccgccaa
gtcgaaataggcatagctttctcaccagagggaacaggcagcctaacgtttacaccccta
tttgaagatgagtttgtggcggtggtgccgccgacatttcccttacacgctagcagcctt
tcatgggcaacgcttttacaggatgacttcatcacccttcagcgcccgtcgatggttcgt
cgcttgctggaactagaactgggcaaacgtaaaattgatttacccgtagcgtttgaaagc
caccaactctcaacggtaggtagaatggtagccgaaggcttgggggttagtgccgtcccc
tctatgtgcattagacagatgcaggcgctaggcgcccgctgcgttcctttaaatagccca
agcattgcttgccgggtaggtataatcacccagcaggagttatcagtcgccgcttacgct
ttgcgtaatgtgcttgtcgaaagtgtaaaagcaccttgcctagctgaaacgttttaa
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