Halomonas sp. GFAJ-1: BB497_12890
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Entry
BB497_12890 CDS
T05375
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hag03009
]
BB497_12890
Enzymes [BR:
hag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
BB497_12890
Ribosome biogenesis [BR:
hag03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BB497_12890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AVI63532
UniProt:
H0J0I6
LinkDB
All DBs
Position
complement(2861034..2861738)
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AA seq
234 aa
AA seq
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MRLDRFLSETTPLTRSLAKRALKNEEVTLNGELIKQSATQIDTAHDEVKLNGETLVLVGL
RYLMMHKPVDVECTARRGLYPRVIDLIDLPKVERLQPVGRLDVDTTGLLLLTDDGQWSHR
VTSPRHRCAKVYIADLAEPFEDESAQWAVKQVAEGIMLDGEETPTQPATLRFITPQQAEL
TITEGRYHQVKRMFAALGNHVTTLHRRSIGDVVLPDDLAPGEWRELTPEEIASF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgatcgcttcttgagtgaaacaactccattaacccgcagcttagccaagcgg
gcgctgaaaaatgaagaagttaccttaaatggtgaactcatcaagcaatcagcgacccag
atagatactgcccacgatgaagtaaaactcaacggtgaaacgctggtattagtcgggctg
cgttacctgatgatgcataaaccggtggacgtcgagtgcaccgctcggcgtgggctctat
ccacgggtaattgacttgattgacctgccgaaagtggagcggctacagccggtagggcgg
ctagatgtcgacaccaccggcctgttattgttgactgacgatgggcagtggtcccaccgg
gtgacctctccgcgccatcgctgtgcgaaggtgtatattgctgatttggctgagccattt
gaggatgagtcggctcagtgggcggtgaagcaggtggccgaagggatcatgctagacggt
gaagagacacccactcagcccgccacgctgcgctttattacgccacaacaagccgaactg
acgataaccgaagggcgctatcaccaagtaaaacgaatgtttgctgccttaggtaatcac
gtgaccacgctgcaccgacgttcgattggcgacgtggtactgccggatgacttagcgccg
ggtgaatggcgagagcttacgcccgaagagattgctagtttctag
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