Halomonas sp. GFAJ-1: BB497_13085
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Entry
BB497_13085 CDS
T05375
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hag03032
]
BB497_13085
03036 Chromosome and associated proteins [BR:
hag03036
]
BB497_13085
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_13085
DNA replication proteins [BR:
hag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BB497_13085
Chromosome and associated proteins [BR:
hag03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BB497_13085
DNA repair and recombination proteins [BR:
hag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BB497_13085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AVI63571
LinkDB
All DBs
Position
complement(2907629..2907901)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEAIAASADIPKAAATRALDAMVESVTDSLKKGESVSLVGFGTFAIKERAARTG
RNPQTGQPIQISAAKVPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtccgagctgattgaagctattgccgcgtctgctgatattcctaaagcagcg
gcaacccgcgcattggatgccatggtggagtctgtcaccgatagcctcaaaaaaggcgag
agtgtttcactggtaggctttggtactttcgcgattaaagagcgcgctgcacgtacaggc
cggaacccacaaacgggtcagccaattcaaatcagcgctgctaaggttcccagctttaaa
gccggaaaagcgctgaaagacgccgtcaactaa
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