Halomonas sp. GFAJ-1: BB497_13230
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Entry
BB497_13230 CDS
T05375
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hag03000
]
BB497_13230
Transcription factors [BR:
hag03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
BB497_13230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
UBA_6
TetR_C_29
HTH_IclR
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AVI63600
LinkDB
All DBs
Position
complement(2937940..2938599)
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AA seq
219 aa
AA seq
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MSAETANHENASRDRIERSILSAAEQVFSRHGYRGASLQAIADQAGLPKANILYYMGNKQ
ALYVRLLNRMMSRWNAVLEDITPESDPGQVLSEFIRTKMLLGQRYPEGSKLFAAEILAGA
PFLSDYLSGELREWVASRAVIIRQWSAQGKMDDVDPRWLIFLIWSSTQHYTEYSAQVSGI
LGRNTLSEADIESISQFLEQIILKGCGIRQSSSPSSIHA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgagaccgctaaccatgaaaatgccagtcgagaccgtattgaacgaagtatc
ttaagtgccgctgagcaggtgttttctcgccacggttaccgcggcgctagcctacaggcg
attgccgaccaagccggtttgcctaaagcaaacattctgtattacatggggaataagcag
gcactgtacgtgcgtttgctgaaccgcatgatgagccgatggaatgcggttcttgaagac
attacccctgaaagtgatcctggacaggtgctgagtgagtttattcgcaccaaaatgttg
cttggacaacgctatccagaaggttcgaagctcttcgccgctgaaattttggccggcgcc
ccgtttttaagcgactatttatcgggagagctgagggagtgggtagcctctcgggcggta
attattcgtcagtggtcagcacagggtaaaatggacgatgttgacccgcgctggctgata
tttttgatctggtcatctactcagcattacactgaatatagtgcccaggtaagcggcata
ctaggtagaaatacgctcagtgaagcggatattgaatcgatttctcagtttttagagcaa
ataattttaaaaggctgcggcattcggcaatcttcctcgcctagcagtatccacgcgtaa
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