Halomonas sp. GFAJ-1: BB497_14010
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Entry
BB497_14010 CDS
T05375
Name
(GenBank) transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hag03000
]
BB497_14010
Transcription factors [BR:
hag03000
]
Prokaryotic type
Helix-turn-helix
Other families
BB497_14010
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_23
Mg_chelatase
HTH_28
AAA_2
HTH_29
HTH_26
HTH_7
HTH_22
HTH_Tnp_ISL3
AAA
AAA_16
HTH_11
HTH_17
HTH_30
TrmB
HTH_50
HTH_1
YNR034W-A-like
AAA_22
IstB_IS21
AAA_7
HTH_3
HTH_AraC
TetR_N
Sigma70_r4_2
HTH_IclR
DUF815
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AVI63744
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Position
3109588..3111594
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AA seq
668 aa
AA seq
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MLHQTHAIKQFQTTSQLQSEQRRHIEHIFQLGEGLDAPCLPAQATIRRSWLRCLNDYQLD
PTHPRPARVVPQQTLIEHRESVDELLHVARAGVDQLYGQIAQLGYVLLVTDHRGITVEFR
GDPNQDQQLRKAGLYLGADWDERFAGTCAVGTCLHDRQAIICHRQEHFDASHISLTCTAA
PIADPQGNVMAVLDISALQSPTQHESQNFSLSLVTLYARMIEDAYFLQRYRDCLMVRLDI
SREFVHVNGRGLIAIEENGQVIAANGVGRELIAEHQHRWPPWSANHIPMLGELFECEIAD
ILSINSGTDDQLRAFRARASNTIHFISLLEPRRPRMAQRATPLTTELPEPLARLGADDPA
MRKVQKLADRLRNEANVNVLICGETGTGKEVVARALHESGNRAKQPFIAVNCAAIPESLI
ESELFGYEPGAFTGGRSKGMRGLIPQAHGGTLFLDEIGDMPLALQTRLLRVLAEREVMPL
GANTPVKIDIRVITATHRHIEEMIQQGEFREDLYYRLNGAQLRLPALRERADKLYVIRRV
FEDVAAERAAQISPRLRADAISALLAYSWPGNIRQLKNALAFALATSESDEITVHDLPEQ
CLSQRITRHEAPQLVADASESQTGSLTQLLKQHHWNISAVARELGVSRPTVYRQMQRQGI
VPPNWQGG
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatcaaacgcacgccattaaacagtttcagacaacttcacagcttcagtctgaa
cagcgtcgacatatagagcatatttttcagcttggtgaagggttagatgccccctgcttg
cctgcgcaggccaccattcgtcgttcctggctgcgctgcctaaatgactatcagctagac
cccactcacccacgcccagcacgggtggtgcctcagcaaaccttgattgagcaccgcgag
tctgttgacgagctactgcatgtcgcccgcgctggggtcgatcaactctatggacaaata
gcccagcttggctacgtgctactggtcaccgaccaccgcggcattaccgttgagtttcgc
ggcgaccccaaccaggaccagcaattacgcaaagcaggcctctacttgggcgctgactgg
gatgaacgctttgctggcacctgcgctgttggcacctgcttgcatgatcgccaggcgatt
atctgccaccgccaagaacacttcgatgcttcccatatttctctaacctgcaccgccgcg
cctattgctgaccctcagggtaacgttatggccgtgttagatatctccgcgctgcagtcg
cctacccagcacgaaagccagaatttcagcctatcgctggtaacgctttatgcgcgcatg
attgaggatgcttattttctgcagcgctaccgcgactgcctgatggtgcgtctagatatc
tcgcgggaatttgtccacgtcaatgggcgtggtttaattgccatagaggaaaatggacag
gtcatcgctgccaacggcgttggccgcgagctaatcgccgaacaccagcaccgctggccc
ccttggtctgcaaatcacattccaatgctaggtgaactattcgagtgtgagatcgccgat
atactcagtattaacagcggtactgatgatcaattgcgtgcttttcgcgctcgcgccagc
aacaccatccactttataagcctgctggaaccccgccgtccccgcatggcgcaacgggca
acaccgcttactactgaactgccggaacccttagcccggctaggtgccgacgaccctgcg
atgcgcaaagtgcaaaaactagccgaccgcttgcgtaatgaagctaacgtgaacgtgctg
atttgcggcgaaaccggcaccggtaaagaggtggtggcacgcgcactgcacgaaagcggc
aatcgcgccaaacaaccgtttattgcggttaattgtgcggccattcctgagtcactgatt
gaaagcgaactgtttggctacgaacctggcgcctttaccggtggccgttcaaaagggatg
cgtgggcttattcctcaggcccatggaggcacgctgtttctagacgaaatcggtgatatg
ccattagcgctacaaactaggctgttacgcgtgctggccgaacgggaagtcatgccgcta
ggcgctaacacgccagtaaaaatcgacattcgcgttattacagcaacccatcgccatatc
gaagaaatgattcagcaaggggaattccgcgaagacctctattaccggcttaacggcgcg
cagctgcgcttacccgcattacgtgaacgcgccgataaactgtatgttattcgccgcgtg
tttgaagatgtcgccgccgaacgcgccgcgcaaatatcgccgcgcctgcgcgcagatgct
atcagtgcgctgctcgcgtattcatggcccggcaatatccgtcaacttaaaaacgctctc
gcttttgccctggcaacctcagaaagtgacgaaatcaccgttcacgatctgccagaacag
tgccttagccagcgaattactcgccacgaagcgccgcagcttgtagccgatgccagtgaa
tctcagacaggctcacttacccaactgctcaagcaacaccactggaatattagcgcggtc
gcacgtgagctaggcgtttcacggcctacggtctaccggcaaatgcagcgccagggaatt
gtgccacccaactggcagggcggttag
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