Halomonas sp. GFAJ-1: BB497_14180
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Entry
BB497_14180 CDS
T05375
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hag02000
]
BB497_14180
Transporters [BR:
hag02000
]
Other transporters
Pores ion channels [TC:
1
]
BB497_14180
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AVI63773
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Position
complement(3141377..3143221)
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AA seq
614 aa
AA seq
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MLNRLHAQSLAAFTLAALPMAVQAQSPTQPQAASTSSHSLNPVVVTAALAPRTANESLSS
VTVLDEATLRRQDPVSITDLFRGQPGVDVSSDGSFGKNSSVFIRGTGSAQNVLLIDGIRL
RSATTGGAAWQYLEPRMFDRAEIVRGPRGSLYGADAMGGVIQLFTPEGREEGPQPRISLG
GGSFNTQRLSAGISGREGGTRYSFSGSHLTTDGQPVRRDGDDKGYDNTSALARVSHTFDN
GAEAGVLALRARGTTEYDESGSLATTDYVQQVAGIYSELPITDNWRSRLTLSEARDESDN
YAYDSILDTQTRTARWENTFSAGAHELIIGAEYMNDSVAGSTTGSKPWDGPYDIEDRDNK
AVFSQALLDFSPVAVQASLRFDDNEAYGDEVTGSLALGYDLDAQHTLHASYGTAFRAPTF
NQLYWPGFGNPDLEPETSETVEVGVRGQFDSWFWDAALYQTDIDNLITGQGLQFNVPETR
IRGAELAAGVEVSDWTLAAALTYTDPENRLTGKRLQNRASQSIRLDADRELGEWSVGGSW
VAQNHRYRDAQNQDRLSGYGLVNLRAGWQFAPLWSARVTLENALDQDYVTTRSFDGADYI
NAGRAGFLSVHFGQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaccgtcttcacgcccaatcgctggcagcatttacgctggctgcgctacctatg
gctgttcaagcacagtcgccaacccagccgcaggcagcttcaacttcctcccattcgctt
aatcctgtcgtggttaccgctgcactagccccgcgcacggctaatgagagtctttcatcg
gtcaccgtgctggatgaagccacgttgcgccgccaagaccctgttagcatcactgaccta
tttcgtggccagcctggagttgatgtctccagtgacggaagcttcggtaaaaacagcagc
gtgtttatccgcggcactggcagcgcgcaaaatgtacttctgattgacggcattcgcctg
cgttcagccaccactggcggtgccgcttggcaatacttagagccacgcatgttcgaccgc
gctgaaattgtacgtggcccccgtggcagcctttacggtgccgatgccatgggcggtgtg
attcagctctttacccctgaaggccgtgaagagggcccgcagccgcgcatctccttaggc
ggtggctcgttcaatacccagcggctaagtgcgggcattagcgggagagagggcggcact
cgttacagtttctccggcagccatcttacgaccgacgggcagcccgtgcgccgtgatggt
gacgacaaaggctacgacaatacttcagcgctggcgcgagtctctcacaccttcgataac
ggagctgaagctggcgtgttggcgctgcgcgcacgtggtaccaccgagtatgacgaaagt
ggctcgttggccacgacggactatgtgcagcaggtagccggtatttatagtgagttgccg
attaccgacaattggcgtagccgtttgacacttagcgaagcacgcgatgagagtgacaac
tatgcctatgactctattctcgacacgcagacgcgcacggcccgctgggagaatacgttt
agcgcgggtgcccatgagctgataatcggcgcggagtatatgaacgatagtgtggccggt
agtaccacagggagcaagccttgggatggtccttatgacatagaggatcgcgataacaag
gctgttttcagccaagcgctgctcgatttctcccctgttgctgtccaggccagcctgcgc
ttcgacgacaacgaggcttacggtgacgaagtgaccggcagcttggcgctgggttatgac
ctggatgcccagcacacgctgcatgccagctacggcaccgccttcagagcgccaacgttc
aaccaactctattggcctgggtttggcaatcccgacttagagccagaaacctccgaaacc
gttgaagttggcgtgcgtggccagttcgacagttggttttgggatgcggcgctttaccaa
acagacatcgataatttgataaccggccaggggcttcagtttaacgtgcctgaaacccgc
attcgtggagcagagctggccgctggtgtggaagtcagcgattggacactggcagctgcg
ctgacttacaccgaccctgaaaaccggctgactggtaagcgtttgcagaaccgtgcctct
caaagcattcgcttagacgcggatcgtgaactaggcgagtggtcggtaggcggctcttgg
gtagctcaaaatcaccggtaccgtgatgcgcaaaaccaagaccgtttgagtggctatggt
ctggtgaatcttcgcgcagggtggcaatttgctccgctgtggagcgcccgtgtcacgctg
gaaaacgcgcttgatcaagactatgtgacaacgcgctcgtttgatggcgctgactacatc
aacgcaggccgagcagggttcttaagtgttcactttggccagtag
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