Halomonas sp. GFAJ-1: BB497_14970
Help
Entry
BB497_14970 CDS
T05375
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hag03032
]
BB497_14970
03036 Chromosome and associated proteins [BR:
hag03036
]
BB497_14970
03400 DNA repair and recombination proteins [BR:
hag03400
]
BB497_14970
DNA replication proteins [BR:
hag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BB497_14970
Chromosome and associated proteins [BR:
hag03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BB497_14970
DNA repair and recombination proteins [BR:
hag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BB497_14970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AVI63913
UniProt:
H0J614
LinkDB
All DBs
Position
3320124..3320420
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIEQIAMRQPELSAKEVETAVRIILDDMTDALASGGRVEIRGFGSFSLHYREPRV
GRNPKTGDPVDLEGKYVPHFKPGKELREQVDASRALGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgaattaatcgaacaaatcgcaatgcggcaaccggagctatccgctaaa
gaagtagaaacggcggtgcgtattatcttggatgatatgacggacgctttagctagcggc
ggacgtgtggagatccgcggctttggcagcttttcgctgcactaccgggaaccacgcgta
gggcgtaaccctaaaaccggcgaccctgtcgatttagagggtaaatatgtccctcacttt
aagccgggtaaggagctacgcgagcaggtagatgcaagccgtgcactgggctactag
DBGET
integrated database retrieval system
