Halomonas sp. GFAJ-1: BB497_15520
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Entry
BB497_15520 CDS
T05375
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
hag
Halomonas sp. GFAJ-1
Pathway
hag03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB497_15520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hag03032
]
BB497_15520
Enzymes [BR:
hag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BB497_15520
DNA replication proteins [BR:
hag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BB497_15520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
LAGLIDADG_3
Intein_splicing
AAA_25
ATPase
AAA_33
nSTAND3
AAA_22
KTI12
MMR_HSR1
GvpD_P-loop
AAA_16
DUF8012
Motif
Other DBs
NCBI-ProteinID:
AVI64019
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All DBs
Position
complement(3438277..3440913)
Genome browser
AA seq
878 aa
AA seq
DB search
MQDKPSADQETAALKLPPHSLEAEQSVLGGLMLDNQAWDNVSERLVTDDFYRYEHRLVFN
VMIHLAESGQPLDVITLSEALEARDQLDTVGGLAFLAELARNTPSASNIRAYADIVRERA
TLRKLIRAANQIADGAFSPQGRPADELLNEAERLVFQIAEERPKTGGPIGMSELLTKAVD
RIDELFNLKGEMTGLSSGFRDLDEMTSGLQPSDLVIIAGRPSMGKTTFAMNLVEHAVIAS
DKPVMVFSMEMPAESLMLRMLSSLGRIDQTRVRSGQLEDEDWPRLTSAVNLLKDKQLFID
DTAALSPNEMRSRLRRVVREHGNMALVMIDYLQLMQIPGFSENRTGEISEISRSLKGLAK
EFQCPVVALSQLNRSLEQRPNKRPVMSDLRECVTGDTLVMLASGERLPIRELVEQTPNVV
SLGENGRLHRSATDLVWSVGTKPVFEVSLASGRRIRATAKHRLKALWDWKTVADLAVGDR
VAVARQLPEPESPVEWDEHALILLAHLLGDGSYVKGQPLRYTTASEANSEVVKCSAEQFG
STVTRHAGRGNWHQLVIAGNGNRWHAKGVGRWLKMLGIFGQRSAEKYIPSDIFKLSNQQL
ALFVRHLWATDGSITSDKNGRTRLYFSTVSRRLIDDVSALLLRFGIVARIRHVVSGKGDG
WYTADVSGGEQQKRFAKYIGAFGHQKAALESLKSGAANLNTNIDTLPQEVFDYVKQAMVE
KGISQRQMASMRGTAYGGSSHFSFSPSRATLSSYADLLGDDALSQVASSDLFWDQIVEIR
PCGEEEVFDLTVPGDACWLADGIVSHNSGAIEQDADVIAFVYRDEVYNPDNPDNQGIAEL
IIGKQRNGPIGTVHMAFIGKYTRFEDLAPDRYGEAFGD
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacaagccttctgctgatcaggaaacggcagcgctgaagttgccgccgcattcg
ctagaggcggagcagtcggtgttaggcgggctaatgttggataatcaagcctgggataac
gtttcagagcgcttggtaaccgacgacttttatcgctacgaacatcgcctcgtcttcaac
gtgatgattcatttagcggagtctgggcagccgctggacgtgataacgctctctgaagcg
cttgaagccagagatcagctcgatacggtgggtgggctggcatttctagccgagcttgcc
cgtaataccccctcagctagtaatatccgcgcctatgcggatattgtgcgtgaacgtgcg
acgctacgtaagcttatccgggcggcaaatcaaatagccgacggagctttctccccacaa
gggcggccagctgacgaactgctcaatgaggccgaacggctggtatttcagatcgctgaa
gagcgtccgaaaaccggtggcccgatcggcatgagtgagctactcaccaaagcagttgac
cgcattgatgagctgttcaatctcaaaggtgaaatgaccgggctttccagcgggttccgc
gatttggatgagatgacatctgggctgcagccctctgatttggtaattatcgccgggcgc
ccctccatgggtaaaaccactttcgctatgaatttggtagagcacgcggttattgccagc
gataaaccggtcatggtgttctctatggagatgcctgccgaatcgctaatgctacgtatg
ctttcatcccttggccggattgaccaaactcgggtgcgttcaggccagttagaagacgaa
gactggccgcgccttacctcagcggtcaacctgctgaaagacaagcaactgtttattgac
gatacggcagcactctcacctaacgagatgcgctcgcggctgcgtcgggtcgtgcgtgag
cacggcaatatggcgttagttatgatcgactacctgcagcttatgcagatccctggcttt
tccgaaaaccgtacgggcgaaatttctgagatttctcgctctttaaaagggttggcaaaa
gagtttcagtgccccgtggtggcgctttcgcagcttaaccgctcgctggagcagcgtccc
aacaaacgtccagtgatgtcggatctaagggagtgtgtcacgggagacacattagttatg
ctggcaagcggagaacgattgccgattcgtgagctggtggagcaaacgcctaatgttgtc
tcgttaggggaaaacggaagactccatcgctccgctacggatttagtgtggtcagtgggc
accaagcctgtgtttgaagtttccctcgccagtggtcggcgtattcgcgccactgccaag
catcgcttaaaagcactgtgggattggaaaaccgtagccgatctagcggtgggtgaccgt
gttgcagtcgccaggcaattgcccgagcctgagagtccggtggagtgggatgagcatgcg
cttattctattagcccatttgctgggtgacggcagctatgtcaaaggacagccgctgcgt
tacaccaccgccagtgaagcgaatagcgaggtcgttaagtgctctgctgagcagtttggt
tcaaccgttacccgccatgctgggcgtggtaactggcatcagctagtcattgccggtaat
ggcaaccgttggcatgcaaaaggggtagggcgttggttgaagatgctgggcatttttggg
cagcgttcagccgaaaaatatattcctagcgatatttttaagctttccaatcagcagctt
gctttatttgtgcgccacctttgggcgaccgacggtagcattacgtcggataaaaatggc
cgtactcggttatatttctctacggttagtcgccgcttaattgatgatgttagcgcactg
ctgctgcgcttcggcattgtagccagaattcgtcacgtggtatctgggaaaggtgatggc
tggtataccgccgatgtgtctgggggagagcagcaaaagcgctttgctaagtacattggc
gcgtttggccaccagaaagcggcattagagtcgcttaaatctggggctgccaatctaaac
accaatatcgataccctgccacaagaagtatttgattacgttaagcaggctatggtggag
aaggggatcagccagcgtcaaatggcatcgatgcggggtactgcttacggaggctcttcg
cactttagtttttcaccttctagggcgacgttaagcagctatgctgacttgctcggtgat
gatgctttatcgcaggttgcttccagtgacctcttttgggatcaaattgtcgagatacgt
ccctgcggagaggaggaggtctttgatttgacggtgccgggtgatgcttgttggctagcc
gacggtatcgttagccataactcgggcgcgattgaacaggatgcggacgttatcgccttt
gtttatcgtgatgaagtctataatccggacaaccctgacaaccaagggattgcggaactg
attattggcaagcagcgtaacgggcctatcggcacggtgcacatggcgtttataggtaaa
tacacccggtttgaagatctagcgcccgatcgctatggcgaagcgtttggcgattaa
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