KEGG   Halomonas sp. GFAJ-1: BB497_16140
Entry
BB497_16140       CDS       T05375                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hag  Halomonas sp. GFAJ-1
Pathway
hag03030  DNA replication
hag03430  Mismatch repair
hag03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BB497_16140
   03430 Mismatch repair
    BB497_16140
   03440 Homologous recombination
    BB497_16140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hag03032]
    BB497_16140
   03400 DNA repair and recombination proteins [BR:hag03400]
    BB497_16140
Enzymes [BR:hag01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BB497_16140
DNA replication proteins [BR:hag03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BB497_16140
DNA repair and recombination proteins [BR:hag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BB497_16140
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AVI64130
LinkDB
Position
complement(3571546..3572271)
AA seq 241 aa
MYEIRPRQKVVQADWISYMAERALRSQDSALKRFFETSLPDPGTPIAEVPMVALDMETTG
LDERRHGIISIGAVPFTLNRIKLTERRYWVVKPPRPLDEASIAYHHITHSEIANAPDLDV
VLNEVLETLAGRLVVVHFRNIERPFLDAAVKDRRGEGVMFPMIDTMSLEARLHRQTLWAR
FRRWIGQPPVSIRLNASRARYGLPAYQGHHALLDALATAELFQAQIAHRYDPDTPLNTLW
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtatgaaattcgaccacgccaaaaagtcgttcaagccgattggattagctacatggct
gagcgcgccttgcgatcgcaagatagtgcgctaaagcggttctttgaaacgtcactcccc
gatccgggtacgcctattgcagaggtaccgatggtggcgttggatatggaaacgacaggg
ctagacgagcggcgccatggcatcattagcataggggctgtgccatttacgctaaaccgc
attaagttaacggagcgccgttactgggtggttaagccgccccgccctctggatgaggcg
tctatcgcttatcaccatatcacgcactcagaaattgctaatgcacctgatttagacgtg
gtgctgaatgaagtgttagaaacgctggcagggcggctagtggtcgtccactttcgtaat
atagagcggccatttttagatgcagcggtaaaagataggcgcggtgaaggcgtgatgttt
ccgatgattgataccatgtcgcttgaggcacgtctgcaccgtcaaacgctatgggctcgt
tttcgccgctggataggccagccgcctgtttctattcgcttgaacgctagccgcgcacgc
tatgggctgcctgcttatcaaggccatcatgctttgttggatgcgttagcgacagcagag
ctatttcaggcacagatcgctcatcgctatgacccagatacgccgttgaatacgctgtgg
tgctaa

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