Halomonas sp. GFAJ-1: BB497_16300
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Entry
BB497_16300 CDS
T05375
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
hag
Halomonas sp. GFAJ-1
Brite
KEGG Orthology (KO) [BR:
hag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hag03021
]
BB497_16300
Transcription machinery [BR:
hag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BB497_16300
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GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AVI64161
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Position
complement(3605313..3606287)
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AA seq
324 aa
AA seq
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MSMLEKDLQEIDLNAVEEAVDDPDDDVTAEEEAFEKALGREDRQSTQSLDATQIYLNEIG
FSPLLTPEEEVYYGRLARKGDALGRSRMIESNLRLVVKIARRYLNRGLTLLDLIEEGNLG
LIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAARELT
QKLDHEATAEEIADHLDKPVETVKKMLGLNERVSSVDYPMGGESDKPLIDTLADDDVQGP
EGCLVDGDVREHVDHWLDELSEKQQEVVVRRFGLRGHEAATLEEVGAEIGLTRERVRQIQ
VEALKKLRRTLEKQGLSLEAIFES
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgctggagaaggatctgcaggagattgacctaaacgcggtggaagaggcggtg
gatgatcccgatgatgatgtcaccgcagaggaggaagccttcgagaaagcgctaggtcgt
gaagaccgtcaatcgactcaaagcttggatgcaacacaaatctacctcaatgaaatcggc
ttttcgccgctgttgacaccagaggaagaggtatattacggccgcttagcgcgcaagggc
gatgcgcttggccgctctcggatgattgagtccaacctgcggctggtggttaaaattgcc
agacgctaccttaatcgcggcttaacgctgttggacctgattgaagagggcaacctgggg
cttattcgtgcggttgaaaaatttgatcccgagcgaggctttcgtttttcaacctacgct
acttggtggatccgccagactatagagcgcgcactgatgaaccaaacgcgtactattcgt
ttgccgattcacgtggtgaaagagctcaatatctacctgcgtgcggcccgggagttgacc
caaaagctggatcacgaagccactgcagaagagatcgccgatcatcttgataaaccggta
gaaaccgtcaagaaaatgctgggtcttaacgagcgcgtttcctcggtggactaccctatg
ggtggcgaaagcgacaagcccttaatcgacaccttggccgatgatgatgtgcaggggcca
gaagggtgtttagttgatggcgatgtgcgggagcacgttgaccactggcttgatgagttg
agcgaaaagcagcaagaggttgttgtgcgccgtttcggcctacgtggccacgaagccgca
acgctggaagaggtgggtgcagagatagggttaacccgagagcgggttcgccagattcag
gtggaggccctaaaaaaacttcgccgcaccctagagaaacagggcttatccttagaggct
attttcgagagctaa
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