Halobacterium sp. GSL-19: JT689_01970
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Entry
JT689_01970 CDS
T07117
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hags
Halobacterium sp. GSL-19
Pathway
hags03030
DNA replication
hags03420
Nucleotide excision repair
hags03430
Mismatch repair
hags03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hags00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JT689_01970
03420 Nucleotide excision repair
JT689_01970
03430 Mismatch repair
JT689_01970
03440 Homologous recombination
JT689_01970
03460 Fanconi anemia pathway
JT689_01970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hags03000
]
JT689_01970
03032 DNA replication proteins [BR:
hags03032
]
JT689_01970
03400 DNA repair and recombination proteins [BR:
hags03400
]
JT689_01970
Transcription factors [BR:
hags03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
JT689_01970
DNA replication proteins [BR:
hags03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
JT689_01970
DNA repair and recombination proteins [BR:
hags03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
JT689_01970
MMR (mismatch excision repair)
JT689_01970
DSBR (double strand breaks repair)
HR (homologous recombination)
JT689_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
OB_Ssb-like
CDC24_OB3
SSB
POT1PC
DUF4454
DUF5666
Motif
Other DBs
NCBI-ProteinID:
QRY22817
LinkDB
All DBs
Position
61093..62520
Genome browser
AA seq
475 aa
AA seq
DB search
MGAIEDVYADLDTDVSIEEFREAVESKVEQMGGLADEETAAMLIAHGIDDGEVNGVADID
SEMDEVKFIAKVTRVGDVRTFDREDADDDDDAAAEGRVVNVTVADETDDVRVSLWDEQAT
AAADDLAPGDVLRIKGRPTDGYNGLEVSADEVELDADEQIDVQIQDEYDAADLSLGVSDV
TLVGEVLDTEAVRTFDRDDGSEGRVSNLVVGDETGRVRVTLWDDQADTATDLDAGAVVEI
VDGYVREREGSLELHVGDTGAVTPVPDADVSFVPDTTSIDSLEQDNTADIAGVVRSVDPT
RTFDRDDGSEGQVRNVRLQDDTGDIRVALWGEKADLDVGPGDEVAALDVEIQDGWQDDIE
ASAGWQASVIPLSDSTQDDAAAGSDGPDRGLAAFGADSDDEPAATDDAADTQTPHSDTPV
EFTGVVVQAQDPLILDDGEETMSVTTDADVTLGQEVTVRGSLDDGRLHADDVTES
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgattgaggacgtgtacgctgacctcgacaccgacgtgtctatcgaggagttc
cgggaggccgtcgagtcgaaggtcgaacagatgggggggctcgccgacgaggagacggcg
gcgatgctcatcgcccacgggatcgacgacggcgaggtgaacggcgtcgcggacatcgac
tccgagatggacgaggtgaagttcatcgcgaaagtcacccgcgtgggtgacgtccgcacg
ttcgaccgcgaggacgccgacgacgacgacgatgcggccgccgaggggcgggtggtgaac
gtcacggtggccgacgaaacggacgacgtccgggtctcgctgtgggacgaacaggccacc
gcggccgccgacgacctcgcccccggggacgtgctccgcatcaaggggcggccgacggac
ggctacaacggcctggaggtcagcgccgacgaggtcgaactcgacgccgacgagcagatc
gacgtccagatccaggacgaatacgacgccgccgacctctcgttgggggtttcggacgtg
accctcgtcggggaggtcctggacaccgaggccgtccggacgttcgaccgtgacgacggc
agcgagggtcgtgtgtcgaatctcgtggtgggcgacgagaccggccgagtgcgagtgacc
ctgtgggacgaccaggccgacaccgcgacggatctcgacgccggggccgtcgtcgagatc
gtggacggatacgtccgcgagcgagagggcagcctcgaactccacgtcggggacaccggc
gcggtcacgccggtcccggacgccgacgtgtcgttcgttccggacaccacgtccatcgac
agcctcgaacaggacaacaccgcggacatcgcgggcgtcgttcggtcggtcgaccccacg
cgcacgttcgaccgcgacgacggcagcgagggccaggtacgcaacgtccgcctgcaggac
gacaccggcgacattcgggttgcgttgtggggcgaaaaggccgatctggacgtcggcccg
ggcgacgaagtggcggccctcgacgtggagatccaggacggctggcaggacgacatcgag
gcgtcggccggctggcaggcgtcggtgatcccgctgtcggacagcacccaggacgacgcc
gccgccggcagcgacggccccgaccgcgggctggcggcgttcggtgccgacagcgacgac
gagcccgccgccaccgacgacgcggccgacacacagactccacacagcgacacgcccgtg
gagttcaccggcgtcgtcgtgcaggcccaggacccgctgattctggacgacggcgaggag
acgatgagtgtcaccaccgacgccgacgtgactctcggccaggaggtcaccgtccgcggc
tcgctcgacgacggccggctccacgccgacgacgtcacggagtcgtga
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