Halobacterium sp. GSL-19: JT689_02385
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Entry
JT689_02385 CDS
T07117
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hags
Halobacterium sp. GSL-19
Brite
KEGG Orthology (KO) [BR:
hags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hags03016
]
JT689_02385 (truD)
Enzymes [BR:
hags01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JT689_02385 (truD)
Transfer RNA biogenesis [BR:
hags03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JT689_02385 (truD)
Prokaryotic type
JT689_02385 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Rrn6_HB
Motif
Other DBs
NCBI-ProteinID:
QRY22894
UniProt:
A0A895A6X9
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All DBs
Position
complement(140497..141801)
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AA seq
434 aa
AA seq
DB search
MREAHPIERAVGMAYYASDSDGTGGRLRDSPADFRVRELEAFDTQPADAPTGDYPWLVVR
ATLHEWDTNDFARELANTVGMSRERVRWAGTKDRHAVTTQLFAVRDLDAAQVPEIRNADI
EVVGRAGRGLEFGDLAGNAFEIVVRDPDAPERAAAVADELAAFGGGTVGTPNYFGQQRFG
SKRPVTHEVGLAILRDDWEAAAMAYLGAPTEHEPADSQRAREYVAETRDWTGALAEFPQR
LRYERTMLHELADGGSFRDAVETFPSNLQQLFVHAAQSYVFNRIVSERMARGLPFGEPVA
GDVVWFADSDADAAVAQPDAARQQRVTDSRVDVMARHCERGRAFVTAPLVGTDTEFADGD
PGEITRGVLDDLDLAPEDFDLPGEFDSAGSRRAILLRPDLTVSHDPLAFEFALPSGSYAT
VVLREFLKPSPLAL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcacaccccatcgagcgcgccgtcgggatggcgtactacgcgagcgacagc
gacggcactggcggccggctgcgggactccccggcggacttccgcgtgcgcgaactcgaa
gcgttcgacacccagccggcggacgcgccgaccggcgactacccgtggctcgtggtgcgt
gcgaccctccacgagtgggacaccaacgacttcgcccgcgaactcgccaacaccgtcggg
atgagccgcgagcgcgtgcggtgggcgggcaccaaggaccgccacgcggtcaccactcag
ctgttcgccgtccgcgatctggacgccgcccaggtgccggagatccggaacgccgacatc
gaggtcgtcgggcgggcgggccgcggcctggagttcggggatctcgccggcaacgccttc
gagatcgtggtgcgggaccccgacgcccccgagcgggccgccgccgtcgccgacgagttg
gcggcgttcggcggcggaaccgtcggcacgcccaactacttcggccaacagcgcttcggg
agcaagcgcccggtcacccacgaggtcgggctcgccatcctgcgcgacgactgggaggcg
gccgccatggcgtacctgggcgcgcccaccgagcacgaacccgcggactcccagcgcgcc
cgcgagtacgtcgcggaaacgcgggactggacgggtgcgctcgcggagttcccacagcgc
ctgcgctacgagcgcaccatgctgcacgagctggccgacggcgggagcttccgggacgcc
gtcgagacgttcccgtcgaacctccagcagctgttcgtgcacgccgcccagtcgtacgtc
ttcaaccgaatcgtctcggagcgcatggcgcgcgggctgccgttcggcgagccggtcgcg
ggcgacgtggtgtggttcgcggacagcgacgccgacgccgccgtcgcccagcccgacgcc
gcacgccagcagcgggtcaccgactcccgggtggacgtgatggcgcggcactgcgagcgc
ggccgcgcgttcgtcaccgcgccgctcgtgggcaccgacaccgagttcgcggacggcgac
cccggggagatcactcggggtgtcctcgacgacctcgacctcgcgcccgaggacttcgac
ctacccggcgagttcgactcggcgggcagtcgccgcgcgatactcctccggccggatctc
acggtcagccacgacccgctggccttcgagttcgcgctgccctccggcagctacgccacg
gtcgtcctgcgggagttcctgaaacccagcccgctggccctctga
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