Halobacterium sp. GSL-19: JT689_04105
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Entry
JT689_04105 CDS
T07117
Name
(GenBank) phytoene/squalene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hags
Halobacterium sp. GSL-19
Pathway
hags00100
Steroid biosynthesis
hags00909
Sesquiterpenoid and triterpenoid biosynthesis
hags01100
Metabolic pathways
hags01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hags00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
JT689_04105
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
JT689_04105
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hags01006
]
JT689_04105
Enzymes [BR:
hags01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
JT689_04105
Prenyltransferases [BR:
hags01006
]
Terpene biosynthesis
Squalene/phytoene synthase
JT689_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF7108
Motif
Other DBs
NCBI-ProteinID:
QRY23220
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All DBs
Position
456834..457877
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AA seq
347 aa
AA seq
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MDGRQSHQPTASDREWCHSAVQDVSRTFALTIDALEEPMATRICVGYLLCRVADTVEDAT
AMPPTEQAQLLETYDAALDPDCGTTVAEFQAAVGDHVPSEPNADWRVVANTTRVVSAFES
LDDAAKAAIRPTVREMATGMASFVQRYADAGGLRIQSPTELEEYCWYVAGTVGELVTELL
ARDAPSDAAAAMRENARSFALLLQLVNVAKDVRPDYEEENNVYLPQEWLDDHDLAPEDVA
DPEHAGRVASVVERVTDRARGYVADAQRWLEVMPTSQGNTFAAWAVPFLLAVGTMRELGN
RPADVVREGDVKVDREEVHAVIGLVADDFDRSAIDSVRERIATESLS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgtcagtcccaccagccgaccgcgtcggaccgcgagtggtgccacagcgcg
gtacaggacgtttcacgtacgtttgcgctcaccatcgacgccctcgaagagccgatggcg
acgcgcatctgcgttggctacctcctgtgccgggttgccgacaccgtcgaggacgccacc
gcgatgccgcccaccgaacaagcacagctcttggagacgtatgacgccgcgctcgatccc
gactgcgggacgaccgtcgcggagttccaggccgccgtcggcgaccacgtccccagcgag
ccgaacgccgattggcgcgtcgtcgccaacaccacccgcgtcgtctccgcgttcgagtcc
ctggacgacgccgccaaggccgcgatccggccgacggtccgggagatggccaccgggatg
gcgtcgttcgtacagcggtacgccgacgccggcgggctccgcatccaatcaccaaccgag
ctcgaagagtactgctggtacgtcgccggcaccgtcggcgaactcgtcacggagctgctg
gcccgcgacgcgcccagcgacgccgccgccgccatgcgcgagaacgcgcggtcgttcgcg
ttgctgttgcagctcgtgaacgtcgccaaagacgtccgcccggactacgaggaggagaac
aacgtctacctgccacaggagtggctcgacgaccacgacctcgccccggaagacgtcgcc
gaccccgaacacgcgggccgcgtggcctccgtcgtcgagcgcgtcaccgaccgcgcccgc
ggctacgtcgccgacgcccagcgctggcttgaggtcatgccgaccagccagggcaacacg
ttcgccgcgtgggcggtgccgttcctgcttgcggtcggcacgatgcgggagctcgggaac
cggcccgccgacgtcgtccgcgagggggacgtgaaagtcgaccgcgaggaagtgcacgcc
gtcatcggcctggtcgccgacgatttcgaccgcagcgccatcgacagcgtgcgcgaacgg
atcgcgaccgagtcgctgtcctga
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