KEGG   Halobacterium sp. GSL-19: JT689_04405
Entry
JT689_04405       CDS       T07117                                 
Name
(GenBank) transcription factor
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
hags  Halobacterium sp. GSL-19
Pathway
hags03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hags00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    JT689_04405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hags03021]
    JT689_04405
Transcription machinery [BR:hags03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     JT689_04405
 Prokaryotic type
  Archaeal type
    TFE
     JT689_04405
SSDB
Motif
Pfam: TFIIE_alpha Sigma70_r3 DUF7129 DNA_ligase_ZBD Zn_ribbon_8 Zn_ribbon_6
Other DBs
NCBI-ProteinID: QRY23278
UniProt: A0A895ACA0
LinkDB
Position
514901..515419
AA seq 172 aa
MAFEDLLDDPVVQKYLHELVGPKGMPVAAAPPDGEVTDEELAERLGLELNDVRRALFILY
ENDLATYRRVRDEDSGWLTYLWTFQYENVPGNLREEMDRLLEALVDRREYELENEFYLCE
VCSIRFEFGEAMDLGFECPECGSAVEAMENTDLVDAMDDRIERLRSELAVEA
NT seq 519 nt   +upstreamnt  +downstreamnt
atggcttttgaggacttacttgacgaccccgtggtacagaagtacctccacgagctggtc
ggaccgaaggggatgcccgtcgcggccgcgccgccggacggcgaggtgaccgacgaggaa
ctcgccgagcgactcgggctggagctcaacgacgtgcggcgcgcgctgttcatcctctac
gagaacgacctcgcgacctaccgccgggtccgcgacgaggactcggggtggctcacgtat
ctctggacgttccagtacgagaacgtgccggggaacctccgcgaggagatggaccgactg
ctggaggcgctcgtcgaccgccgcgagtacgaactcgaaaacgagttctacctctgtgag
gtctgttcgatccgcttcgagttcggcgaggcgatggacctcgggttcgagtgtccggag
tgtggctccgccgtcgaagccatggagaacaccgacctcgttgacgcgatggacgaccgc
atcgagcgactgcgctcggaactcgccgtggaggcctaa

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