Halobacterium sp. GSL-19: JT689_04405
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Entry
JT689_04405 CDS
T07117
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hags
Halobacterium sp. GSL-19
Pathway
hags03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hags00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JT689_04405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hags03021
]
JT689_04405
Transcription machinery [BR:
hags03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
JT689_04405
Prokaryotic type
Archaeal type
TFE
JT689_04405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
DUF7129
DNA_ligase_ZBD
Zn_ribbon_8
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QRY23278
UniProt:
A0A895ACA0
LinkDB
All DBs
Position
514901..515419
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AA seq
172 aa
AA seq
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MAFEDLLDDPVVQKYLHELVGPKGMPVAAAPPDGEVTDEELAERLGLELNDVRRALFILY
ENDLATYRRVRDEDSGWLTYLWTFQYENVPGNLREEMDRLLEALVDRREYELENEFYLCE
VCSIRFEFGEAMDLGFECPECGSAVEAMENTDLVDAMDDRIERLRSELAVEA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacttacttgacgaccccgtggtacagaagtacctccacgagctggtc
ggaccgaaggggatgcccgtcgcggccgcgccgccggacggcgaggtgaccgacgaggaa
ctcgccgagcgactcgggctggagctcaacgacgtgcggcgcgcgctgttcatcctctac
gagaacgacctcgcgacctaccgccgggtccgcgacgaggactcggggtggctcacgtat
ctctggacgttccagtacgagaacgtgccggggaacctccgcgaggagatggaccgactg
ctggaggcgctcgtcgaccgccgcgagtacgaactcgaaaacgagttctacctctgtgag
gtctgttcgatccgcttcgagttcggcgaggcgatggacctcgggttcgagtgtccggag
tgtggctccgccgtcgaagccatggagaacaccgacctcgttgacgcgatggacgaccgc
atcgagcgactgcgctcggaactcgccgtggaggcctaa
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