Halobacterium sp. GSL-19: JT689_04835
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Entry
JT689_04835 CDS
T07117
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hags
Halobacterium sp. GSL-19
Pathway
hags03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hags00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JT689_04835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hags03021
]
JT689_04835
Transcription machinery [BR:
hags03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
JT689_04835
Prokaryotic type
Archaeal type
TFB
JT689_04835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Trm112p
Zn_ribbon_RRN7
Sigma70_r4
Cyclin_N
Motif
Other DBs
NCBI-ProteinID:
QRY23355
UniProt:
A0A895A4D3
LinkDB
All DBs
Position
complement(601353..602339)
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AA seq
328 aa
AA seq
DB search
MTNQRTTRDGSHGTESVPTQRSRESTDEDHGCPECNGDLVTDEDRGETTCGECGLVVEED
GIDHGPEWRAFNAQEQDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNTLSGRQRRKMQ
RLRKWNERFRTRNSKERNLKQALGEIERMASAFGLPDSVRETASVIYRRALGEDLLPGRS
IEGVATSALYAAARQANTPRSLDEVASVSRVDRGEIARTYRYVARELSLEVAPTDPASYV
PRFCSDLELSGDVERRARDLLAAAADAGITSGKSPVGLAAASVYAAALLTNERVTQNEVS
TVANVSEVTIRNRYHEILDAGGEPGVEA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccagcgcacaacacgagacgggagccacggcacggaatcagtacccacgcag
cgcagccgtgagtccaccgacgaagaccacgggtgcccggagtgcaacggcgacctggtg
accgacgaggatcgcggggagaccacctgcggcgagtgcggcctcgtggtcgaggaggac
ggcatcgaccacggccccgagtggcgcgcgttcaacgcccaagaacaggacgagaaatcc
cgcgtgggcgctccgaccacgaacatgatgcacgacaaggggttgtccacgaacatcggc
tggcaggacaaagacgcctacggcaacaccctgtcggggcgccagcggcggaaaatgcag
cgcctgcgcaagtggaacgagcgcttccgcacccgcaacagcaaggaacgcaacctcaag
caggcgctgggtgagatcgagcgcatggcctccgcgttcgggctgccggacagcgtccgg
gagaccgcgtcggtgatctaccgccgcgcgctcggcgaggacctgctgcccgggcgctcc
atcgagggcgtcgccaccagcgcactgtacgccgccgcgaggcaggcaaacacgccccgc
agcctcgacgaggtcgcaagcgtcagccgcgtcgaccgcggcgaaatcgcgcgcacgtac
cgctacgtggcccgcgagctcagcctcgaagtcgcgccgacggatcccgcgagttacgtt
ccccggttttgctctgacctggagctgtccggcgacgtcgaacggcgcgcccgagacctg
ctggccgccgccgccgacgccggcatcacgtccgggaagtcgcccgtcggcctcgccgcg
gcgtccgtgtacgcggcggcgctgctcacgaacgagcgcgtcacgcaaaacgaggtcagc
accgtcgcgaacgtcagcgaggtcaccatccgcaaccgctaccacgagatcctggacgcg
ggcggtgaacccggcgtggaagcgtaa
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