KEGG   Halobacterium sp. GSL-19: JT689_06955
Entry
JT689_06955       CDS       T07117                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
hags  Halobacterium sp. GSL-19
Pathway
hags03022  Basal transcription factors
hags03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hags00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    JT689_06955
  09124 Replication and repair
   03420 Nucleotide excision repair
    JT689_06955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hags03021]
    JT689_06955
   03400 DNA repair and recombination proteins [BR:hags03400]
    JT689_06955
Enzymes [BR:hags01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     JT689_06955
Transcription machinery [BR:hags03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     JT689_06955
DNA repair and recombination proteins [BR:hags03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     JT689_06955
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII PhoH AAA_22 AAA_11 AAA_30 Glyco_trans_1_2
Other DBs
NCBI-ProteinID: QRY23753
UniProt: A0A895ACU4
LinkDB
Position
979052..981454
AA seq 800 aa
MGDADEPWREFFGFEAPYDQQADAIGAAIEAGDSDGFLAMEGPCGTGKTMAALTAGAHLV
RNTDSYERVLVVTPVKQQLEQFVADLRTMNAGLDDPLDGVALVGKRDLCPYEREDKFPDD
AGVHERCEDLRESTAGLVEGDDGGEFDGQDARDLTELPAAETPDEPWWDPAAGRALARSA
RADASRTLSQTPLRTAATDAPYVPHQPTAPEDMADGDPPLMCPFEADWYGRDKGSPVGFE
AGRHNVVTSADVLPAGVDHGTCPHRVQQVLLDHAEVVVGNYNHLFDPQTRGLTDHLIDDS
TFVVVDEAHRLEERVRDLLSDRVGRHTLTRARNDCRTLLTRANQSRENRQQVTDHLASHD
CSLDAVEAMVGFLDDVLEWLDDRVARYLAAEGFDPDRPGSLPERDHEIPLRDPESEQPDA
LTQWAEQHGHTGDAWRSLAATGTAVQAILDDDGDRSAVAGPVGVTLQRWWERDHATYFRE
VELEHVPKESGRAGAAWAESYTPALVMFNCMPARALRETLSEVGGGVLMSATLEPLDVFR
EVAGLDRLAAGAGDSDPRPVVERRYDLRFPESNRASFLVDATPFTAHNRGDPEPGTDNPT
RDEYRYVLRTVARQPGNVLVCMPNYREAAWAAAYLSDGVVEKDVLVDESSSNAATDDLKA
TFFAGDGKVLVTSTRGTLTEGVDYDGAKLGACLVVGVPLVNVGSPRIRAVRRAYADAFGD
DHAFEYALTVPAVRRARQAIGRVIRGPEEVGVRVFAGGRYVEDARHSVFEYLGPGERAEF
TTLTPSFLGSQLDAFRSESD
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgggcgacgccgacgagccgtggcgcgagttcttcgggttcgaggcaccgtacgaccag
caggccgacgccatcggggcggccatcgaagccggtgacagcgacggcttcctcgcgatg
gaggggccttgcgggacgggcaagacgatggcggcgctgaccgcgggcgcgcacctcgtg
cgcaacaccgacagctacgagcgcgtgttggtggtgacgccggtcaaacagcaactggag
cagttcgtcgcggacctccgaacgatgaacgcgggcctcgatgaccccttggacggcgtg
gcgctcgtcggaaagcgggatctctgcccgtacgagcgcgaggacaagttccccgacgac
gccggcgtccacgagcgctgcgaggacctccgggagtcgactgccggcctcgtggagggc
gacgacggcggcgagttcgacgggcaggacgcacgcgacctcaccgaactgccggcggcg
gagacccccgacgagccgtggtgggatcccgcagcgggtcgggcgctggcgcggtcggcg
cgcgccgacgccagccggacgctctcgcagaccccgctgcggacggctgccacggacgca
ccgtacgtcccccaccagccgaccgcccccgaggacatggccgacggcgacccgccgctg
atgtgtccgttcgaggccgactggtacggccgcgacaagggctcgccggtcggcttcgag
gccggccggcacaacgtcgtcacgagcgcggacgtgttgcccgcgggcgtcgaccacgga
acgtgcccccaccgcgtccagcaggtgctgttggaccacgcggaggtcgtcgtcgggaac
tacaaccacctcttcgacccccagacccgggggctcactgaccacctcatcgacgactcg
acgttcgtcgtggtcgacgaagcccaccgcctagaggagcgcgttcgggacctgctctcg
gaccgcgtggggcggcacacgctcactcgcgcccgcaacgactgccggacgctgctcaca
cgggccaaccagagccgggagaaccgccagcaggtcaccgaccacctcgccagccacgac
tgctcgctcgacgccgtcgaggcgatggtcgggttcctcgacgacgtgctggagtggctc
gacgaccgcgtggcgcgatacctcgccgcggaggggttcgaccccgaccgcccggggtcg
ctgcccgaacgcgaccacgagatcccgctgcgggaccccgaaagcgagcagcccgacgcg
ctcacgcagtgggccgaacagcacggccacaccggggacgcgtggcggtcgctggcggca
accggcaccgcggtgcaggcgatcctcgacgacgacggcgaccgatcggcggtggcaggc
cccgtgggcgtcacgctccagcggtggtgggaacgcgaccacgcgacgtacttccgggag
gtggagctagagcacgtgcccaaggagtcggggcgggccggcgcggcgtgggccgaatcc
tacacccccgcgctcgtgatgttcaactgcatgcccgcccgcgcgctccgggagacgctg
tcggaggtcggcggcggcgtgttgatgagcgccaccctggaaccgctggacgtgttccgg
gaggtcgccggcctggaccgcctggcggcgggcgcgggcgacagcgacccccgccccgtc
gtggagcgccgctacgatctgcggttccccgaatcgaaccgcgcgagcttcctcgtcgac
gccacgccgttcacggcgcacaaccgcggcgaccccgagccgggcaccgacaacccgacg
cgcgacgaataccgctacgtgctgcggacggtcgcccgccagcccggcaacgttctcgtc
tgcatgccgaactaccgggaggcggcgtgggcggccgcctatctcagcgacggcgtcgtc
gagaaggacgtgctcgtcgacgaatcgtcgtcgaacgccgcgactgacgacctcaaagcg
acgtttttcgctggcgacggcaaggtgctggtgacgagcacacggggcacgctcaccgag
ggcgtcgactacgacggcgcgaaactcggggcgtgtctcgtcgtcggcgtgccgctggtg
aacgtcgggtcgccacggattcgggcggtcaggcgagcgtacgccgacgccttcggcgac
gaccacgccttcgagtacgccctgacggtgcccgcggttcggcgcgccagacaagccatc
gggcgcgtgatccgcggccccgaggaggtcggggtgcgcgtgttcgccggcggccggtac
gtcgaggacgcacgccactccgtcttcgagtatctcggcccgggtgagcgcgccgagttc
acgacgctcacgccgtcgttcctcgggagccagctggacgcgttccgctcggagtcggac
tga

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