Halobacterium sp. GSL-19: JT689_06955
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Entry
JT689_06955 CDS
T07117
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hags
Halobacterium sp. GSL-19
Pathway
hags03022
Basal transcription factors
hags03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hags00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JT689_06955
09124 Replication and repair
03420 Nucleotide excision repair
JT689_06955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hags03021
]
JT689_06955
03036 Chromosome and associated proteins [BR:
hags03036
]
JT689_06955
03400 DNA repair and recombination proteins [BR:
hags03400
]
JT689_06955
Enzymes [BR:
hags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JT689_06955
Transcription machinery [BR:
hags03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
JT689_06955
Chromosome and associated proteins [BR:
hags03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
JT689_06955
DNA repair and recombination proteins [BR:
hags03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
JT689_06955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
AAA_22
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QRY23753
UniProt:
A0A895ACU4
LinkDB
All DBs
Position
979052..981454
Genome browser
AA seq
800 aa
AA seq
DB search
MGDADEPWREFFGFEAPYDQQADAIGAAIEAGDSDGFLAMEGPCGTGKTMAALTAGAHLV
RNTDSYERVLVVTPVKQQLEQFVADLRTMNAGLDDPLDGVALVGKRDLCPYEREDKFPDD
AGVHERCEDLRESTAGLVEGDDGGEFDGQDARDLTELPAAETPDEPWWDPAAGRALARSA
RADASRTLSQTPLRTAATDAPYVPHQPTAPEDMADGDPPLMCPFEADWYGRDKGSPVGFE
AGRHNVVTSADVLPAGVDHGTCPHRVQQVLLDHAEVVVGNYNHLFDPQTRGLTDHLIDDS
TFVVVDEAHRLEERVRDLLSDRVGRHTLTRARNDCRTLLTRANQSRENRQQVTDHLASHD
CSLDAVEAMVGFLDDVLEWLDDRVARYLAAEGFDPDRPGSLPERDHEIPLRDPESEQPDA
LTQWAEQHGHTGDAWRSLAATGTAVQAILDDDGDRSAVAGPVGVTLQRWWERDHATYFRE
VELEHVPKESGRAGAAWAESYTPALVMFNCMPARALRETLSEVGGGVLMSATLEPLDVFR
EVAGLDRLAAGAGDSDPRPVVERRYDLRFPESNRASFLVDATPFTAHNRGDPEPGTDNPT
RDEYRYVLRTVARQPGNVLVCMPNYREAAWAAAYLSDGVVEKDVLVDESSSNAATDDLKA
TFFAGDGKVLVTSTRGTLTEGVDYDGAKLGACLVVGVPLVNVGSPRIRAVRRAYADAFGD
DHAFEYALTVPAVRRARQAIGRVIRGPEEVGVRVFAGGRYVEDARHSVFEYLGPGERAEF
TTLTPSFLGSQLDAFRSESD
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgccgacgagccgtggcgcgagttcttcgggttcgaggcaccgtacgaccag
caggccgacgccatcggggcggccatcgaagccggtgacagcgacggcttcctcgcgatg
gaggggccttgcgggacgggcaagacgatggcggcgctgaccgcgggcgcgcacctcgtg
cgcaacaccgacagctacgagcgcgtgttggtggtgacgccggtcaaacagcaactggag
cagttcgtcgcggacctccgaacgatgaacgcgggcctcgatgaccccttggacggcgtg
gcgctcgtcggaaagcgggatctctgcccgtacgagcgcgaggacaagttccccgacgac
gccggcgtccacgagcgctgcgaggacctccgggagtcgactgccggcctcgtggagggc
gacgacggcggcgagttcgacgggcaggacgcacgcgacctcaccgaactgccggcggcg
gagacccccgacgagccgtggtgggatcccgcagcgggtcgggcgctggcgcggtcggcg
cgcgccgacgccagccggacgctctcgcagaccccgctgcggacggctgccacggacgca
ccgtacgtcccccaccagccgaccgcccccgaggacatggccgacggcgacccgccgctg
atgtgtccgttcgaggccgactggtacggccgcgacaagggctcgccggtcggcttcgag
gccggccggcacaacgtcgtcacgagcgcggacgtgttgcccgcgggcgtcgaccacgga
acgtgcccccaccgcgtccagcaggtgctgttggaccacgcggaggtcgtcgtcgggaac
tacaaccacctcttcgacccccagacccgggggctcactgaccacctcatcgacgactcg
acgttcgtcgtggtcgacgaagcccaccgcctagaggagcgcgttcgggacctgctctcg
gaccgcgtggggcggcacacgctcactcgcgcccgcaacgactgccggacgctgctcaca
cgggccaaccagagccgggagaaccgccagcaggtcaccgaccacctcgccagccacgac
tgctcgctcgacgccgtcgaggcgatggtcgggttcctcgacgacgtgctggagtggctc
gacgaccgcgtggcgcgatacctcgccgcggaggggttcgaccccgaccgcccggggtcg
ctgcccgaacgcgaccacgagatcccgctgcgggaccccgaaagcgagcagcccgacgcg
ctcacgcagtgggccgaacagcacggccacaccggggacgcgtggcggtcgctggcggca
accggcaccgcggtgcaggcgatcctcgacgacgacggcgaccgatcggcggtggcaggc
cccgtgggcgtcacgctccagcggtggtgggaacgcgaccacgcgacgtacttccgggag
gtggagctagagcacgtgcccaaggagtcggggcgggccggcgcggcgtgggccgaatcc
tacacccccgcgctcgtgatgttcaactgcatgcccgcccgcgcgctccgggagacgctg
tcggaggtcggcggcggcgtgttgatgagcgccaccctggaaccgctggacgtgttccgg
gaggtcgccggcctggaccgcctggcggcgggcgcgggcgacagcgacccccgccccgtc
gtggagcgccgctacgatctgcggttccccgaatcgaaccgcgcgagcttcctcgtcgac
gccacgccgttcacggcgcacaaccgcggcgaccccgagccgggcaccgacaacccgacg
cgcgacgaataccgctacgtgctgcggacggtcgcccgccagcccggcaacgttctcgtc
tgcatgccgaactaccgggaggcggcgtgggcggccgcctatctcagcgacggcgtcgtc
gagaaggacgtgctcgtcgacgaatcgtcgtcgaacgccgcgactgacgacctcaaagcg
acgtttttcgctggcgacggcaaggtgctggtgacgagcacacggggcacgctcaccgag
ggcgtcgactacgacggcgcgaaactcggggcgtgtctcgtcgtcggcgtgccgctggtg
aacgtcgggtcgccacggattcgggcggtcaggcgagcgtacgccgacgccttcggcgac
gaccacgccttcgagtacgccctgacggtgcccgcggttcggcgcgccagacaagccatc
gggcgcgtgatccgcggccccgaggaggtcggggtgcgcgtgttcgccggcggccggtac
gtcgaggacgcacgccactccgtcttcgagtatctcggcccgggtgagcgcgccgagttc
acgacgctcacgccgtcgttcctcgggagccagctggacgcgttccgctcggagtcggac
tga
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