Halobacterium sp. GSL-19: JT689_07275
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Entry
JT689_07275 CDS
T07117
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hags
Halobacterium sp. GSL-19
Brite
KEGG Orthology (KO) [BR:
hags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hags03000
]
JT689_07275
Transcription factors [BR:
hags03000
]
Prokaryotic type
Helix-turn-helix
Other families
JT689_07275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAT
HTH_10
PAS_9
PAS
PAS_3
GAF_2
PAS_4
PAS_8
GAF_3
Response_reg
DmsR_N
GAF
PAS_12
Motif
Other DBs
NCBI-ProteinID:
QRY21830
LinkDB
All DBs
Position
complement(1037895..1039919)
Genome browser
AA seq
674 aa
AA seq
DB search
MTSVQNTESETAAGATTIGVLFAGSDPETGPAACDLDEDGRFDVTQIRDFVAARDRVDDP
DIDCVVAVHEPDGFDGVAFLEAVRQTHAEFPVVVVPTAVDEDVARRAVDADATGLVPAVS
EDATATIADRIEQSAPAHSEDTETRMPISDLTVESERRLKEQALDEAPIGITISDATDPE
EPIIYINDSFEDITGYSPDEVVGANHRFLQGPKTNEDRVAEFWTAITEDHDTQVVLRNYR
RDGSLFWNQVDISPIYDEDGTVSHYVGFQMDVSERMAAQQELQGERQSLDRLLDRVNGLM
NDVTSALVRAADREEIETRITDRIGTGGEYAGAWFGRYDATEDTITVAEAAGDCEGCDGD
VFDLASAGEAVALLQDVVEQREALVSTDADDVSGTADGDACVLVPVTYRSTTYGVLAVST
AEHRIDDREQVLLRSLGRTTGASINDALTRRTIATDTVLNIGVELSDTALFLVELAGATD
TTFEQEATIADSQTQGVLMLVTTPHDDPQAVVDTALGYDAVQDAEVIVSTDDESVVQFDL
SSSPLVDVLSECGSRVIRMHADRTTLELDVRVGTEGAARRVLSTLRDKYADVELVAYHED
DPEQTPHGFREELRSDLTDRQLTALQKAYVSGYFEWPRRAEGKQLAESMDIVPSTYHQHL
QAAKQKLVGAFFEE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgtccagaacaccgagtccgagaccgccgccggcgcgacgacgatcggcgtg
ttgttcgcgggcagcgacccggagacggggccggctgcctgcgacctcgacgaggacggc
cgcttcgacgtgacccagatccgtgatttcgtggccgcacgcgatcgcgtcgacgatccc
gacatcgactgtgtggtcgccgtccacgagccggatggcttcgacggcgtggcgttcctg
gaagcagtccggcagacccacgcggagttcccggtcgtggtcgtgccgacagccgtcgac
gaggacgttgcgcggcgcgccgtcgacgccgacgcgacggggctggtgccggcggtgtcc
gaggacgccaccgcgacgatcgccgaccgcatcgagcagagcgcgcccgcccactccgag
gacaccgagacgcggatgccgatctccgacctgaccgtggagtccgagcgccgcctcaaa
gagcaagccctcgacgaggccccgatcgggatcacgatctcggacgccaccgacccggag
gagccgatcatctacatcaacgactccttcgaggacatcacggggtattcgcccgacgag
gtcgtgggcgcgaaccaccgcttcctccaggggccgaagaccaacgaggaccgcgtggcg
gagttctggaccgcgatcaccgaggaccacgacacccaggtcgtgttgcggaactaccgc
cgcgacgggtcgctgttctggaaccaggtggacatcagcccgatctacgacgaggacggc
accgtctcacactacgtcgggttccagatggacgtctccgagcgcatggctgcccaacag
gagctccagggggaacgccagtccctggatcgactgctggaccgcgtgaacggcctgatg
aacgatgtcacgtcggcgttagtgcgggcggccgaccgggaggagatcgaaacccggatc
accgaccgcatcggcaccggcggcgagtacgccggcgcgtggttcgggcggtacgacgcg
accgaggacacgatcacggtcgcggaggcagcgggggactgtgagggatgcgacggcgac
gtcttcgatctcgcgtccgccggcgaggccgtcgcgttgcttcaggacgtcgtcgagcag
cgcgaagcgctcgtgagcacggacgccgacgacgtctccgggaccgccgacggcgacgcg
tgcgtgctggtgccggtcacgtaccggtcgacgacctacggcgtgctcgccgtgtcgacg
gccgaacaccgcatcgacgaccgcgaacaggtgttgttgcgctcgcttggccgcacgacc
ggcgcgtcgatcaacgacgcgttgacccggcgcaccatcgccacggacaccgtgttgaac
atcggcgtcgagctgtccgatacggcgctgttcctggtcgagttggcgggggcgacagac
accaccttcgagcaggaggcgacgatcgcggacagccagacgcagggcgtgctcatgctc
gtgacaacgccacacgacgacccccaggcggtcgtcgacaccgcgttgggctacgacgcc
gtccaggacgccgaggtcatcgtctcgaccgacgacgagagcgtggtgcagttcgatctg
tcgagttcgccgctggtggacgtgctctccgagtgtgggagccgggtcatccgcatgcac
gccgaccggacgacgctggagctcgacgtccgggtcggaaccgagggggcggcgcggcgg
gtgttgagcacgttgcgggacaagtacgccgacgtggagctggtcgcgtaccacgaggac
gatcccgagcagaccccgcatgggttccgcgaggagttgcgcagcgacctgactgaccgg
cagctcaccgccctccagaaggcgtacgtgagcggctacttcgagtggccgcggcgcgcg
gagggcaagcagctcgcggagtcgatggatatcgtgccgtcgacgtaccaccagcatctg
caggctgccaagcagaagctcgtcggcgcgttcttcgaggagtga
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