Halobacterium sp. GSL-19: JT689_08060 Help Entry JT689_08060       CDS       T07117                                  Name (GenBank) CDC48 family AAA ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism hags  Halobacterium sp. GSL-19 Pathway hags04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:hags00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     JT689_08060  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hags03019]     JT689_08060    03009 Ribosome biogenesis [BR:hags03009]     JT689_08060    04131 Membrane trafficking [BR:hags04131]     JT689_08060   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:hags04147]     JT689_08060 Messenger RNA biogenesis [BR:hags03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      JT689_08060 Ribosome biogenesis [BR:hags03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     JT689_08060 Membrane trafficking [BR:hags04131]  SNARE   SNARE associated proteins    Others     JT689_08060  Autophagy   Aggrephagy    Other aggrephagy associated proteins     JT689_08060 Exosome [BR:hags04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    JT689_08060 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA CDC48_N AAA_lid_3 CDC48_2 AAA_16 RuvB_N AAA_5 TIP49 AAA_22 AAA_2 AAA_33 AAA_14 nSTAND3 NPHP3_N RNA_helicase IstB_IS21 AAA_28 Mg_chelatase AAA_7 AAA_18 AAA_3 ABC_tran Sigma54_activat AAA_17 DUF815 ATPase Parvo_NS1 NB-ARC AAA_24 AAA_30 TsaE AAA_11 AAA_lid_PRS2_C PhoH SLFN-g3_helicase KAP_NTPase NACHT Zeta_toxin Vps4_C IPT OrgA_MxiK Motif Other DBs NCBI-ProteinID:  QRY21974 UniProt:  A0A895A4D5 LinkDB All DBs Position 1194870..1197098 Genome browser AA seq 742 aa AA seqDB search MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN TDTIRIDGFTRQNAEVGIGERVKIRKADAEKADTLVLAPPEEASVQFGSDAAGMVKRQIL KRPVVARDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVCLVTEDTDVELREEPISGFE RTGGGITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLA KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKRED VTGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEI GREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEE DIPPSLIDRMIVKREDFKGALSEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEW PLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES EKAIRQTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEV MVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAE RADGYVGSDLANIAREAAIEALRDDEDADDVGMAHFRAAMENVRPTITDDLMEYYDQVED QFKGSQGPNVNSRQGSEHIGFQ NT seq 2229 nt NT seq  +upstreamnt  +downstreamnt atgaacgaagtccaactggaggtcgcgaaagcctaccccaacgattcgggacgggggatc gcgcgcctcgatccagacacgctgttgcatctcaaactcagcccgggagacatcatcgaa atcgagggggccgaaaccacggccgcgaaggtctggcgagccgaccgccaagactggaac acggacaccatccggatcgacgggttcacgcgccagaacgccgaggtcggcatcggggag cgcgtgaagatccggaaagccgacgccgaaaaagcggacacgctcgtcctcgcacccccc gaggaagcgagcgtgcagttcggcagcgacgccgccggcatggtcaaacgccagatcctc aagcggccggtcgtcgcccgcgacatcgttcccgtgatgtcctcgacgaaccacccgttc atgcgatccccaggccaggcgatcccactgatcgccgtcgaaacggagcctgagggcgtc tgcctggtgaccgaggacaccgacgtcgagctgcgcgaggagccgatcagcggcttcgag cgcaccggcggcggcatcacgtacgaggacatcggcggcctcgaaaacgagattcagcgc gtccgggagatggtcgaactcccgatgaaacacccccagatcttccagaagcttggcatc gaaccgccacagggggtgttgctgcacgggccgccgggcaccgggaagaccctactggcg aaagccgtcgccaacgagacgtcggcgagtttcttctcgatcgccggtcccgagatcatc tcgaagtattacggcgaatccgagcagcagctccgggagatcttcgaggacgccaaagac gactcgccgtcgatcatcttcatcgacgagctggactccatcgcgcccaagcgcgaggac gtcaccggcgaggtcgagcgccgcgtggtcgcccagctgttgacgatgatggacggcctg gagggccgcgggcaggtcatcgtcatcgcggcgaccaaccgcgtcgacgccgtcgacccc gcgctgcggcggccggggcgtttcgaccgcgagatcgagatcggcgtccccgacgagatc gggcgcgaggagatcctgaagatccacacccgggggatgccgctgtccgacgacgtgaac ctctcgacgctggccgacgacacccacgggttcgtcggcgcggacatcgagagtctcagc aaggaggccgcgatgcgggcgctgcgccggtacctcccggagatcgatctcgacgaggag gacatcccgccgagcctgatcgaccgcatgatcgtcaagcgcgaggacttcaagggcgcg ctcagcgaggtggagccgtccgcgatgcgggaggttctcgtggagctgccgaagatcacg tgggacgacgtcggcgggctcacggaggcgaaaaacaacgtcaaggagtccgttgagtgg ccgctgaaccagccggagaagttcacgcggatgggcgtcgagccgcccgccggcgtgttg ctgtacgggccgccgggcaccgggaagacgctgatggcgaaggccgtcgccaacgagacg aacgccaacttcatctcggtgcgggggccacagctgctgtcgaagtgggtcggcgaaagc gagaaggcgatccgccagacgttccggaaggcccgccaggtcgcgccgaccgtgatcttc ttcgacgagctggacagcctcgcgcccggccgcgggcagaccggcgggaacaacgtcagc gagcgcgtcgtcaaccagctgttgaccgagctggacggcctcgaggagatggaggaagtg atggtgatcgcggcgaccaaccgcccggacatcatcgacccggcgttgatccgcagcggg cgcttcgaccgcctcgtgcaggtcggccagccggggatcgagggccgcgagcagatcctg aagatccacacccaggacacgccactagcggcggacgtctcgcttcgggagctcgccgag cgcgcggacggctacgtgggcagcgacctcgcgaacatcgcccgggaggcagccatcgag gcgctccgggacgacgaggacgccgacgacgtcggcatggcgcatttccgggcggccatg gagaacgtccggccgacgatcaccgacgacctcatggagtattacgaccaggtcgaagac cagttcaagggcagccagggccccaacgtgaacagccgccagggcagcgagcacatcggc ttccagtag

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