Halobacterium sp. GSL-19: JT689_08405
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Entry
JT689_08405 CDS
T07117
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hags
Halobacterium sp. GSL-19
Brite
KEGG Orthology (KO) [BR:
hags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hags03400
]
JT689_08405
Enzymes [BR:
hags01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JT689_08405
DNA repair and recombination proteins [BR:
hags03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JT689_08405
Prokaryotic type
JT689_08405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QRY22040
LinkDB
All DBs
Position
complement(1246952..1248340)
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AA seq
462 aa
AA seq
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MHLYWHQRDLRVPDNRGLHAATDGDTVVPVYVFDDTVLSQVGRPKRAFLAAGVRALRAAY
RERGSDLLVREGDAESVLPALADEFDADTVFHAAHYDAARRNRRTRVADALAAAGVDTAG
HVDHTLVDPATLDDAYPSHSQFYDDWQQAPKPDPVPAPDADALADVHDDHTLSVPAPEPP
LPDAGHAAATDRLAAFLDDGIASYNDTRDDLAAAVDAPTSAVSRLSPYLAAGNIGVREVW
AAVADAYDDATGDAARNIGKYRYELSWREQNYHLLYHTPRLQTENYVSFDAPIAWQNSDD
HFEAWTRGETGYPLVDAGMRQLRAEGYVHNRPRQVVASFLTKHLLVDWRRGERHFADRLV
DYDPANNAANWQWTASTGTDTVAVRIFDPVSQMAKYDSDAAFVTEYVPELRGVDPETIVD
WPTLRHSQRERLAPDYHHPIVDRDHAYERAQRVFEAALDGDA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgtactggcaccaacgcgacctccgcgttcccgacaaccgcggcctccacgcc
gccaccgacggcgacaccgtcgtgcccgtctacgtcttcgacgacaccgtgctctcccag
gtgggccgccccaagcgcgcgttcctcgccgccggcgtgcgcgcactgcgggcggcgtac
cgcgagcgcggcagcgacctcctcgtccgcgagggcgacgccgaatccgtgctgccggcg
ctggccgacgagttcgacgccgacaccgtgttccacgccgcccactacgacgccgcgcgg
cggaaccgccgcacgcgggtcgcggacgcactcgccgccgcgggcgtcgacaccgcgggc
cacgtcgaccacacgctcgtcgaccccgcgaccctcgacgacgcctacccctctcacagc
cagttctacgacgactggcagcaggcaccgaaacccgacccggtgcccgcgccggacgcc
gacgcgctggccgacgtccacgacgaccacacgctctcggtcccggcccccgagccgccg
ctcccggatgcgggacacgcggccgccaccgaccgcctcgcggcgttcctcgacgacggc
atcgcgtcgtacaacgacacccgggacgacctcgcggcggcggtcgacgcccctaccagc
gccgtctcccggctgtcgccgtatctcgcggccggcaacatcggcgtccgcgaggtgtgg
gcggccgtcgccgacgcctacgacgacgccaccggggacgcggcgcggaacatcgggaaa
taccgctacgagctgtcctggcgcgagcagaactaccacctgctgtaccacaccccccgc
ctccagacggagaactacgtcagcttcgacgccccgatcgcgtggcagaacagcgacgac
cacttcgaggcgtggacccggggggagaccggctacccgctggtggacgccggcatgcgc
cagctccgcgcggaggggtacgtccacaaccgcccccggcaggtggtcgccagcttcctc
acgaaacacctcctggtggactggcggcgcggcgagcgccacttcgccgaccggctggtg
gattacgaccccgcgaacaacgccgcgaactggcagtggaccgcctccaccggcacggac
acggtcgccgtccgcatcttcgatccggtcagccagatggcgaaatacgattccgatgcg
gcgttcgtcaccgagtacgtccccgagctgcgcggcgtcgaccccgagaccatcgtggac
tggccgacgctgcgccactcccagcgcgaacgcctcgcgcccgactaccaccacccgatc
gtcgaccgcgaccacgcctacgagcgcgcccagcgcgtcttcgaagcggccctggacggg
gacgcgtga
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