Halobacterium sp. GSL-19: JT689_09915
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Entry
JT689_09915 CDS
T07117
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
hags
Halobacterium sp. GSL-19
Pathway
hags03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hags00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
JT689_09915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hags03019
]
JT689_09915
03012 Translation factors [BR:
hags03012
]
JT689_09915
Messenger RNA biogenesis [BR:
hags03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
JT689_09915
Translation factors [BR:
hags03012
]
Eukaryotic type
Release factors
JT689_09915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DUF7562
Zn_ribbon_8
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QRY22325
UniProt:
A0A895A1T0
LinkDB
All DBs
Position
1524641..1525891
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AA seq
416 aa
AA seq
DB search
MSEQDEVPSEDRRKYEFRKVIEELKDYEGSGTQLVTIYIPPDKQISDVVAHVTQEHSEAS
NIKSKQTRTNVQDALTSIKDRLRYYDTFPPDNGMVVFSGAVDSGGGRTDMVTEVLESPPQ
PIESFRYHCDSAFLTEPLAEMLGDKGLYGLIVLDRRESNVGWLKGKRVQPVKSAESLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAGMADDLFVPKRHEIDGILVGGPSPTKDEFLDG
DYLHHELQDKVLGKFDVSYTDESGLSDLVDAGQAALAEADLMDDKSDMEEFFEELNGGKL
ATYGFEQTRRNLIMGSVDRLLVSEDLREDVVIYECPNDHEEYETIDRRNTSPEHTCSDCG
EEATEVDREDAIDHLMSIADQRGTETHFISTDFEKGEQLLTAFGGYAGILRYSTGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaggacgaggtaccgtccgaggaccgacgcaagtacgagttccgcaaggtc
atcgaggagctcaaagactacgagggcagcggcacccaactggtcaccatctacatcccc
ccggacaagcagatctcggacgtcgtggcccacgtcacccaggagcactccgaggcctcc
aacatcaaatccaagcagacacgcaccaacgtccaggacgccctcacgtcgatcaaagac
cgactgcgctactacgacacgttccccccggacaacgggatggtcgtgttctcgggcgcg
gtcgactccggcggcggccgcacggacatggtcacggaagtcctggagtcgccaccccag
cccatcgagtcgttccgctaccactgcgactcggcgttcctcaccgaacccctcgcggag
atgctcggcgacaagggcctctacgggctgatcgtcctcgatcgccgcgagtcgaacgtc
ggctggctgaagggcaagcgggtccaaccggtgaaatccgcggagtccctggtgcccggg
aaacagcgcaagggcggccagtccgcccagcggttcgcccggctgcgcctggaagccatc
gacaacttctaccaggaggtcgcgggcatggccgacgatctcttcgtgccgaagcgccac
gagatcgacggcatcctcgtgggcggcccgtcaccaacgaaagacgagttcctcgacggg
gattacctccaccacgagctccaggacaaggtcctggggaaattcgacgtgtcgtacacc
gacgagtccgggctgtcggatctggtcgacgcggggcaggcggcgctggcggaagccgac
ctgatggacgacaaatccgacatggaggagttcttcgaggagctcaacggcggcaagctc
gccacctacgggttcgagcagacgcgccgaaacctcatcatgggctcggtcgaccgcctg
ctggtctccgaggacctccgcgaggacgtcgtcatctacgagtgccccaacgaccacgag
gagtacgaaaccatcgaccgccggaacaccagccccgagcacacgtgttcggactgcggc
gaggaggccaccgaggtcgaccgcgaggacgccatcgaccacctcatgtcgatcgccgac
cagcgcggcacggagacgcatttcatctccacggacttcgagaagggcgagcaattgctg
accgcgttcggcgggtacgccgggattttgcggtactcgaccggcgtgtag
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