Halobacterium sp. GSL-19: JT689_10120
Help
Entry
JT689_10120 CDS
T07117
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
hags
Halobacterium sp. GSL-19
Brite
KEGG Orthology (KO) [BR:
hags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hags03019
]
JT689_10120
Messenger RNA biogenesis [BR:
hags03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
JT689_10120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QRY22362
LinkDB
All DBs
Position
1562062..1564116
Genome browser
AA seq
684 aa
AA seq
DB search
MSEQVQRVDTLFLHETGDDYLAVANRDGDRLFRAKLEVAEKSAGPRPARFRRKTDGGEEP
RNPEEFVEIARRAGRIRISQQTTAAGREEVQAMLDAYQLAAKVVRTCRYCAGRGRYSPLT
AETAIEADGEFICRDCAVEELERELSFSGAVSGAAQDRLEELLFAEQDLEKVTGLLGGEL
DPDLTKYDEVSATTDDVDPVAVSELDLHPDVQGLFEDRFEELLPVQSLAVENGLVEGDDQ
MVVSATATGKTLVGEIAGLHRLQSGNGKLLFLVPLVALANQKHEDFQDEYGHLANVTIRV
GSSRIRDDGHAFDPAADIIVGTYEGIDHALRTGRDLGDIGTVVIDEVHTLKEDDRGHRLD
GLISRLKYYCEQRREERAGYDGAQWVYLSATVGNPGELAGKLRANLVEFEERPVPIERHV
TFADGAEKPDIENTLVRREFDQESSMGYRGQTIIFTNSRRRCNEISRKLDYPSRPYHAGL
DYGERKSVERQFGDQDLAAVVTTAALAAGVDFPANQVIFDTLAMGIEWLSVQEFEQMLGR
AGRPDYHDRGKVYVLVEPDASYHSSMEGTEEEIAFTLLKGDMENVVTHYDEDAAVEETLA
NVTVGGTAAKRLNDRMVGDIPTKHALGKLLEYEFIDGLEPTDRGRAVTTHFLDPDSAFRI
LDGVRKGHAPGRIIATLELREDDQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgagcaggtccagcgcgtggacacgttgttcctccacgagacgggcgacgactac
ctcgcggtggccaaccgcgacggcgaccggctgttccgcgcgaaactagaggtcgcggag
aaaagcgccgggccccgtccggcccggtttcggcggaagaccgacggcggcgaggagcca
cgcaaccccgaggagttcgtggagatcgcgcgccgcgccggccgcatccgcatcagccag
cagacgacggccgcgggccgcgaggaggtccaggccatgctggacgcctaccagctcgcc
gcgaaggtggtgcggacgtgtcggtactgcgcgggccgcgggcggtactccccgctcacc
gcggagaccgccatcgaggccgacggcgagttcatctgccgggactgcgcggtcgaggag
ctggagcgcgagctctccttttcgggggcggtgtcgggggccgcacaggaccgcctcgaa
gagctgctgttcgccgagcaggacctcgaaaaggtcaccgggctgctgggtggcgagctc
gaccccgacctgacgaaatacgacgaagtgtcggcgaccaccgacgacgtcgaccccgtg
gccgtctcggagttggacctgcatccggacgtccaggggctcttcgaggaccgcttcgag
gaactgctgcccgtccagagtctcgccgtcgagaacgggctcgtcgagggcgacgaccag
atggtggtgtcggcgacggcgaccgggaagacgctggtcggcgagatcgcgggcctccac
cggctgcagtccggcaacggcaagctgctgtttctcgtcccgctggtggcgctggccaac
cagaaacacgaggacttccaggacgaatacggccacctcgcgaacgtcaccatccgcgtg
gggtcctcgcggatccgggacgacggccacgccttcgaccccgccgcggacatcatcgtc
ggcacctacgagggcatcgaccacgcgctgcggacgggccgcgacctgggcgacatcggc
acggtcgtcatcgacgaggtgcacacgctcaaagaggacgaccgcggccaccgcctcgac
ggcctcatctcgcggctgaaatactactgcgagcagcgccgcgaggagcgcgcgggctac
gacggcgcccagtgggtgtatctctccgcgaccgtcggcaaccccggcgagctggcgggg
aagctgcgcgcgaacctcgtggagttcgaggagcgccccgtgcccatcgagcgccacgtc
acgttcgccgacggcgccgagaagcccgacatcgagaacacgctcgtccgccgggagttc
gaccaggagtcctcgatggggtaccgcgggcagaccatcatcttcaccaactcgcggcgg
cgctgcaacgagatctcgcgcaaactcgactacccctcgcggccgtaccacgccggcctc
gactacggcgaacgcaaatccgtcgagcgacagttcggcgaccaggacctcgcggccgtc
gtgacgacggcggcgctcgcggcgggcgtcgacttccccgccaaccaggtcatcttcgac
acgctggcgatgggcatcgaatggctctccgtccaggagttcgagcagatgctcggccgc
gccggccgtcccgactaccacgaccgcgggaaggtgtacgtgctcgtcgaacccgacgcg
tcgtatcactcctcgatggagggcaccgaggaggaaatcgcgttcacgctcctgaaaggc
gacatggagaacgtggtcacgcattacgacgaggacgccgccgtcgaggagacgctggcg
aacgtcaccgtcggcggcacggccgccaaacgcctcaacgaccgcatggtcggggacatc
cccacgaaacacgccctggggaagctactggagtacgagttcatcgacggcctggagccg
acggaccgcgggcgcgcggtcaccacgcacttcctggatccggacagcgcgttccgcatc
ctcgacggcgtgcgcaagggccacgcgcccggccgcatcatcgcgaccctggaactccgc
gaggacgaccagtag
DBGET
integrated database retrieval system
