Halophilic archaeon: Halar_0252
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Entry
Halar_0252 CDS
T01603
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hah
Halophilic archaeon
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hah03400
]
Halar_0252
Enzymes [BR:
hah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halar_0252
DNA repair and recombination proteins [BR:
hah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Halar_0252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_11
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEN07512
LinkDB
All DBs
Position
phalar01:242608..245454
Genome browser
AA seq
948 aa
AA seq
DB search
MTTPNDQQQELIDSKQGIHVVDAGAGTGKTFTVTRRYAEIVDQDDVEPEDVLLVTFTNNA
ATEMRERIVANCDYGMRELSDAPIQTFHSLCHDILMEHGFEAPTLLGIDDRITGSTRVLE
DENVEKAQFREFIRRFSDDHPEYDDFFRAVAEPVELLGLINQLAAKGVFPTADGWYRNGE
RHLDGDFEAFREIFDELNQPRNDGDKQSKLRSKLGGYGNDKCYLPDAPEEDEIRGGWGEK
QVPAAVARLVFDEQRENLKNFVHDVYHEYLEFALSRNYLNFSFLQLFAFVLLCDDHRLRD
DVAFEYVMIDEFQDSSEIQFKLALLLADTNNVCVVGDWKQSIYSFQYAAVENITEFESRL
DRFVDELNEDHERVSWATRSIIDIELDENYRSTQDILDFSEHSLVTPAASTDDIDEAAVR
DRIVSLSSNASHENSQIEAIQHEDEHEAVLTKIHEIVGNDAYQVEEDGELRLPEHGDIAV
LTRTRDFGRGLLSVAEEYGLPMAYEGGIELFRSDPAKLLLAWLRILESDAERGWAVVLEE
AGYTLDEVKHVLDSEEYPANMQAFKSELASLETVGGISQRVFSQYDYDGAYADVLLTTIQ
SVHSATTLTRGDLIRFIERGIEDGSTHEVHASAGMNSVTVQTIHAAKGLEHPIVVLANMN
SHRFPPSGGNSNAITFDDPIGLRQRKLYADDHGYPHIHDNWRSDVLRKCLPRGYDEERRL
LYVAMTRAESHLVFAAGESPNTFIEELPVDLEELEPDVQDDDIDETTQAHLQIAVPAPDG
PVGHSPHTLMRDDVFEDVDDGRGTAFGTRTHEFAERYILEEDVEPSNDDERHIKSFIDSL
DGELRVEEDAYLPLTVDGEQVTISGIVDLVHIRPNTVGIIDFKTDLSRHAQGEYRKQLSV
YHHVLDEWFPDREVTAEIFYTAEGTRVDVEPFSRADLVEIVAEISTSE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaccgaacgaccaacagcaagagctcatcgacagcaaacagggcatccacgtc
gtcgacgccggggcggggaccgggaagacgttcaccgttacccgtcgatacgcagaaatc
gtcgaccaggacgacgtcgagcccgaggacgtcctcctcgtgacgttcaccaacaacgcg
gcgacggagatgagagagcgaatcgtcgccaactgtgactacgggatgcgtgaactctcg
gacgcgccgatccagacgttccacagcctctgtcacgacatcctcatggaacacggcttc
gaggccccgacgctcctcggtatcgacgaccgcatcactggatccacacgcgtcctcgaa
gacgagaacgtcgagaaggcgcagttccgcgaattcatccgtcgattcagcgacgaccac
cccgagtacgacgatttcttccgcgccgtcgcagaaccagtcgaactcctcggactaatc
aatcagctcgcagcgaaaggtgtcttcccgacggctgatggctggtaccggaatggcgag
cggcatctggacggtgacttcgaggcatttcgcgagatcttcgacgagctgaaccagccc
cgaaacgacggggacaagcagtccaagcttcgctcgaaactcggaggctacgggaacgac
aagtgctacctcccggacgcgcccgaggaagacgagattcgtggcggatggggtgagaag
caagttcccgctgccgtcgcacggctggtgtttgacgaacagcgagagaacctcaagaat
ttcgttcacgacgtctaccacgagtatctcgagttcgcactcagtcggaactacctcaac
ttcagcttcctccagctgttcgcgttcgtcctgctctgtgacgaccatcgactccgcgac
gatgtcgcgttcgagtacgtgatgatcgacgagtttcaggactccagcgagatccagttc
aaactcgcactcctgctcgcggacacaaacaacgtctgtgtcgtcggtgactggaaacag
agcatctactccttccagtatgccgccgtcgagaacatcaccgagttcgagtcccgcctg
gatcgattcgtcgacgaactcaacgaggaccacgagcgagtatcgtgggcgacccgctcg
atcatcgatatcgagctcgatgagaattatcggtcgacacaggacattctcgacttctcc
gagcacagcctagtgacgcccgcggcgagcacggacgacattgacgaggcggccgttaga
gatcgaattgtgtcactctcctcgaacgcatcgcacgagaactctcagatagaggcgatt
caacacgaagacgaacacgaagccgttctgaccaagattcacgagatcgtcgggaacgac
gcgtatcaggtcgaggaagacggggaacttcgtctgccagagcacggtgacatcgccgtc
ctcacccggactcgtgacttcggccgaggactcctctctgtcgccgaggagtacggcttg
ccgatggcgtacgaaggtggaatcgagctattccgatctgacccggcgaagcttctcttg
gcgtggctgcgaattctcgaatccgacgcagagcgaggatgggcggtcgtccttgaggaa
gctggctacacgctcgatgaggtcaaacacgtcctcgatagcgaggaatatcccgccaat
atgcaggcgttcaaatcagagcttgcgtcactggagacagtcggtgggatttcacagcgc
gtgttctcccagtacgattacgacggggcctacgccgacgtgttgttgacgacgatccag
tctgtccacagcgcgacgacgttgacacgaggtgatctcatccggttcatcgaacgcggc
atcgaggacggaagcacccacgaggtccacgcgagcgccggtatgaattcggtgacggtc
cagactatccacgcagccaagggactcgaacatcccatcgtcgtgctcgcgaacatgaac
tctcatcgcttcccaccgtcaggcgggaacagtaacgcgatcacgttcgacgatccgatc
gggctacgccagcggaagctctacgccgatgatcacgggtatccccacatccacgacaac
tggcggagtgacgtcctccggaagtgcctgccgcgtggatacgatgaggaacgacgcttg
ctctacgtcgcaatgacgcgggctgagagccacctcgtgttcgctgcaggcgagtccccg
aacacgttcattgaggagctcccggtcgacctcgaagaactagagcccgacgttcaagac
gacgatatcgacgagacgacgcaggcacacttgcagattgctgtgccggcgccggatggt
ccagtcggtcactcgccgcacacgctcatgcgtgacgatgtgttcgaggacgtcgatgac
gggagagggacagcgttcggaacgcggactcacgagttcgctgagcggtacatcttggaa
gaggatgtcgagccctcgaacgacgatgaacgtcacatcaagtcgttcatagactcgctc
gatggtgagttgcgagttgaggaggatgcgtatctgccactcactgttgacggtgagcag
gtcaccatctccggaatcgttgacctcgttcacatccgtcccaataccgtcgggatcatc
gacttcaagaccgaccttagtcggcacgctcagggcgaataccggaagcaactcagcgtg
taccatcacgtgttggatgagtggttccctgatagagaggtgaccgcagagatcttctat
actgccgaaggaacccgcgttgacgtcgaaccgttctcacgagcagacctcgtcgagatc
gtagccgaaatcagtactagcgagtga
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