Halophilic archaeon: Halar_0474
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Entry
Halar_0474 CDS
T01603
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hah
Halophilic archaeon
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hah03400
]
Halar_0474
DNA repair and recombination proteins [BR:
hah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Halar_0474
Archaeal homologous recombinant proteins
Halar_0474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_21
SMC_N
ABC_tran
AAA_23
AAA_15
AAA_29
ABC_tran_CTD
AAA_13
AAA_27
Baculo_PEP_C
AAA_16
AAA_22
SbcC_Walker_B
DUF7235
AAA_25
AAA
RuvB_N
Img2
DUF3450
ZapB
Motif
Other DBs
NCBI-ProteinID:
AEN07720
LinkDB
All DBs
Position
phalar01:complement(463811..466804)
Genome browser
AA seq
997 aa
AA seq
DB search
MTDIPAELEATGEVTPVYPIEDCADEPERAKSAESLYRIERTREQGFDDEVLFVRLLTGG
DHDWETLLEIDTRQLELEFYNDDTPNQWNIQLFWAYEDDSVPDDEFRREFERKTKFAIRR
CVPCELLEEFLRPLEHSRQALSEVNDEFGREALVQRVTGNGLEFLFDQNTNRDEKFERLL
EIDMDDVGSARAPSSVTTDNRPTAVDTVELGDFREEASKQRLDAAQFTLLYGPNGTGKTS
LLDGVTMGLVGQTRRDDDRVATYDELSVTLKGDDEPLPMDSGSVNDRVADWFGFRPQGPA
RRHVEFYRVNYHEAGETTRLLEPTTDLEIERVFRNFLYGEDLAYATKEKDELLDLLDGEI
NDTEEEIEEIESKRKELEVRRDKVKDALSTLGSAQRDLSAATSALVENDDSGGGREWTDE
EPPREQISRWRDWLRRFERLEEGLDATMSDLTWETARDLRSGLDGEEDLLEQRKKGLKDV
RELKDERRRVVEVGKQVESEMTTELPFSTFFTGLLFVANGTGREDVRRLVRGIEETDLKV
EEIESKQSAESWCETVETALHKRRENLEETRNRLAELGDLEERRQELRKQIRADTEEYLE
ITDDEDVQHCPACYVEQSAKDIRTRKEPEHTHDAGGVPESLTESLRNVEQALEVVESVDL
AAIDDAIRRYGGHLCSFDDVPRLFGLVADGREGVLPPEATPEIVEAVARLAQNQPVYKRS
ADAVLTTVLEKIEADIAELTSEIRDFGPSTDVHRQIDDCEDRLSAVQRGLDVLENQWPEE
LLDASPAVESDRRMLEFAVEEAVDSAVSKPVSKLSDEIDTKMDESDRLKDRIERLKETRD
HLRETFAGVEESLDEVLGEYTEIVTTLFKVFQRPYDFNRVELTDDNEKLQVVRRESGEVV
GIDEMSSGQRTALVLAIFVTNNLAHDSAPPLMLLDEPFAHLDELNTLSFFNLVIELAVRG
DRQIVFATANDNLASLLERKVGETEAFERVNLENRRR
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatatcccggcggagttggaagcgactggagaggtaactccggtctatccgata
gaagactgcgctgacgaacctgaacgtgcgaagagcgcggagtcgctgtaccggatagaa
cggactcgggaacagggattcgatgacgaggtgttgttcgtccggctgctgacgggtggc
gaccacgactgggagacgctactggagatagacacccgacagctcgagctggagttctac
aatgacgacacgccgaaccagtggaacatccagctgttctgggcctacgaggacgacagt
gtacctgacgacgagtttcgccgcgaatttgagagaaagacgaagttcgccatccggcgg
tgtgtcccctgcgagttgctggaggagttcctccgcccactggagcacagccgtcaggca
ctgtccgaggtgaacgacgaattcgggcgcgaggcgctcgtccagcgggtgactggcaac
ggtttggagttcctgttcgatcagaacaccaaccgcgacgagaagttcgagcgactgctg
gagattgacatggatgatgtcggcagtgctcgcgccccgtcatcggtgacgaccgataac
cgcccgacggccgtcgacactgtcgaactgggagacttccgggaggaggcgtctaaacag
cgactcgacgctgcgcagttcaccctcctgtacggccctaacgggaccggaaagacgagt
cttctcgacggggtcacgatggggctcgtcggccagacccgccgtgacgacgaccgtgtc
gccacctatgacgagttgagtgtcacgctgaagggggacgacgaaccgctaccgatggac
tcgggatcggtgaacgaccgggtcgccgactggttcgggttccggccgcaggggccggcg
agacggcatgtcgaattctaccgcgtcaactaccacgaggccggcgagacgacgcgactc
cttgaaccgacgaccgacttggagatcgagcgagtgttcaggaacttcctctacggcgaa
gacctcgcgtacgctacgaaggaaaaggacgaacttctggacctgcttgatggggagatt
aacgatacagaagaggagattgaggagatcgagtcgaaacgaaaggaactcgaagtccgc
cgagacaaggtgaaagacgccctctcgacgctcggaagcgctcaacgtgacctttcggcg
gcaacgtctgcgctcgtcgaaaacgacgattcgggaggcggaagagaatggacagacgag
gagccgccacgtgaacagatctcacgttggcgggactggctgcgacggttcgaacggctt
gaggagggactcgacgccacgatgtcagacttgacctgggagaccgcccgcgatctacgg
tcgggacttgacggcgaggaggaccttctcgagcagagaaagaagggcctcaaggatgtt
cgggagttgaaagacgagcgtcgccgggtcgttgaggttgggaaacaagtcgagtccgag
atgactacagaactgccgttctcgacgttcttcactggactcctcttcgtcgccaatgga
accggccgagaggacgtacgtcgactcgtccggggaatcgaggagacggatctcaaagtc
gaggagatcgaatcgaaacaatccgccgaatcgtggtgcgagaccgtcgaaacggcactg
cacaaacggcgcgagaacttggaagagacccgcaaccgactggcagaactcggtgatctg
gaggaacgtcggcaagaactccgtaagcagatccgtgcagacactgaggagtacctcgag
atcactgacgacgaagacgttcaacactgcccagcctgttacgtcgaacagtctgccaag
gatatccggacacgcaaggagcccgagcacacacacgacgcgggcggtgttccggagagt
ctcaccgaatcgctgagaaatgtcgagcaggcgctggaggtcgtcgagagtgtcgacctg
gcagctatcgacgacgccatccgtcggtacggcggccacctgtgtagcttcgacgacgtt
ccgcggctgttcggtctcgtcgcagacggcagggaaggggttctgccccccgaggcgact
cccgagatagtagaggcagtcgccaggctagcacagaaccagcctgtctacaaacgttcg
gccgatgcggtgctaacaacggttctagagaaaatcgaggccgacatcgcagagctgacc
tcggagatacgcgacttcggtcccagcacagatgtacaccgacagatcgacgactgtgag
gatcgactgtcggccgttcagcggggactcgatgtactcgaaaatcagtggccggaagaa
ctgctcgacgccagccccgcggttgagtccgaccgtcggatgctagagttcgcagtcgaa
gaggcggtggactcggccgtgtcgaagccggtctcgaagttgtcggacgaaatcgacacg
aagatggacgagagcgaccgtctgaaagatcgtattgaacgactgaaagagacgcgtgat
cacctcagggagacgttcgcaggtgttgaggagagcctcgacgaagttctcggggagtac
accgagatagtcacgacactgttcaaagtgtttcagcgaccctacgacttcaaccgcgtc
gaactcaccgacgacaacgaaaaactccaggtcgtccggcgggaaagcggagaggtggta
gggatcgatgagatgagttccggccagcggacggcgctcgtgctggcgatcttcgtcacg
aacaacctcgcacacgactccgcgcctccgttgatgttgctagacgagccgttcgcgcac
ttggacgagctcaatacgctgtcgtttttcaatctcgtgatcgagctcgcagtccggggc
gaccgacagatcgtgttcgctaccgcgaacgacaacctcgcctcgctgctggagcgcaag
gtgggcgagaccgaggcgttcgagcgggtcaatttggagaaccgtcgtcgctga
DBGET
integrated database retrieval system
