Halophilic archaeon: Halar_0546
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Entry
Halar_0546 CDS
T01603
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hah
Halophilic archaeon
Pathway
hah03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Halar_0546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hah03021
]
Halar_0546
Transcription machinery [BR:
hah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Halar_0546
Prokaryotic type
Archaeal type
TFB
Halar_0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
DZR_2
RB_B
FYVE
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AEN07783
LinkDB
All DBs
Position
phalar01:complement(538719..539645)
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AA seq
308 aa
AA seq
DB search
MATRETYTTAFGEDVQTDSSTNQCPECDGRVTTNAVETVCEDCGLVIDEQRIDHGPEWRT
FDEDECKRTGAPLTAARHDRGLSTEIGRRTDANGNELSSQKQRRLWRLRREQSRGRFQSK
AERNLAHGLGEVRRISSALELSETLRDQACRLFRSAQNEDFLRGRSIEAMAAASIYGACR
CNGRPRTLNEVTDSARVEDSRITNAYTTLNTELGLPAQPVTPSAFVPRLASELDVSDQLR
QRARRLAEASEATGATTGVRPSGFAAACLYKAGREQGRRLTQSDVAEVANVSPVTVRTHR
DALDELAV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccagagaaacctacacgacggcattcggcgaagacgtacagactgactccagc
acgaaccagtgccccgagtgcgacggtcgagttactaccaacgcggttgaaactgtctgc
gaggattgtggcctcgtcatcgacgagcagcgaatcgatcacgggcccgagtggcgaaca
ttcgatgaagatgagtgcaagcggacgggcgctccactcacagcggcgcggcacgatcgg
gggttgtcgacggagatcggccgcaggaccgacgcgaacgggaacgaactctccagccag
aagcaacgccggttgtggcggctgcgacgtgaacagagtcgggggcggtttcagtcgaaa
gctgagcgcaacctcgcacacgggctcggtgaagtccgccggatcagtagtgcgctcgag
ctatccgagacgcttcgtgaccaggcctgtcggctcttccggagcgcccagaacgaggac
ttcctccgcgggcggtcgatcgaagcgatggccgccgcgagcatctacggggcgtgtcgc
tgtaacgggcgaccgcgaacgctcaacgaagtcaccgattcagcgcgcgtcgaggactcg
cggatcactaacgcgtacacgacgctgaacacggagctcggcctaccggcccagcccgtg
acgcccagtgcgtttgtcccgcgattggcgtcggagctcgatgtctccgaccagctccgg
cagcgggcccggcggttggccgaagcgtccgaagcaaccggagccaccacgggggttcgg
ccgtctggatttgccgcagcctgcctgtacaaggctggacgcgaacagggacgacggctt
acccagtcggatgtcgcggaggtagcgaacgtctcaccagtcaccgttcggacccaccgc
gacgcgctggacgaactggctgtgtaa
DBGET
integrated database retrieval system
