Halophilic archaeon: Halar_0940
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Entry
Halar_0940 CDS
T01603
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hah
Halophilic archaeon
Pathway
hah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Halar_0940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hah03021
]
Halar_0940
Enzymes [BR:
hah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Halar_0940
Transcription machinery [BR:
hah03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Halar_0940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
AEN04705
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Position
complement(221113..222945)
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AA seq
610 aa
AA seq
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MAGKQQRPAKVYVNGSLVGTHPEPDELAAQIRESRRQGEISEMVNVAVKDRTREVIVNAD
AGRARRPLIVVEDGDPRLTDEHIEGVENDELQFDDLVDRGIIEFIDAEEEEDILVAVDEG
DITDDHTHLEVDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPSANYRIRPDTR
QHLMHYPQLSMVKTQTTEQIGFDERPAAQNFTVAVMSYEGFNIEDALVMNQGSVERGLAR
SHFFRTYEGEERRYPGGQEDRFEMPSQDVRGARGEDAYTHLDEDGLVNPETKVDESSVLL
GKTSPPRFLEEQDDMGGLSPQKRRETSVTMRSGEDGVVDTVTLMEGEDGSKLSKVSVRDE
RIPELGDKFASRHGQKGVVGHLAPQEDMPFTEEGLVPDLVLNPHALPSRMTVGHVLEMLG
GKVGALEGRRVDGTAFQGESEEELRSSLEERGFKSSGKEVMYSGVTGEKIDAEIFVGTIF
YHKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRVGEMEREVLIGHGAALALKERL
LDSSDRESVYISEDTGMVAVEDVEQRRVYDPVTKNEDNIHELDVSYAFKLLLDEMKALGI
RPKLELEDAV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaacaacagcgacctgcgaaggtctacgtcaacggcagcctcgtgggcacc
cacccggagcccgacgagctggcagcacagatccgcgagtcccgccgacagggcgagatt
agtgagatggtcaacgtggcggtcaaagaccgcacccgcgaggtcatcgtcaacgccgac
gctggccgtgcgcgccgcccgctcatcgtcgtcgaagatggtgatccccgcctcaccgac
gaacatatcgagggcgtcgagaacgacgaactccagttcgacgatctggtcgaccgcggc
atcatcgagttcatcgacgccgaggaggaggaggacatcctcgtcgccgtcgacgagggc
gacatcaccgacgaccacacgcacctcgaggtcgacccgcagctcatcttcggtatcggt
gccgggatgattccgtacccggaacacaacgcctccccgcgcattacgatgggtgcaggg
atgatgaagcagtcactcgggcttccctccgcgaactaccggattcggcccgatacgcgc
cagcacctgatgcactacccacagctctcgatggtcaagacccagaccaccgagcagatc
gggttcgacgagcgcccggccgcccagaacttcacggtcgcggtcatgagctacgagggg
ttcaacatcgaggacgcgctggtcatgaatcagggctcggtcgagcgcggcctcgcccgc
tcgcacttcttccgcacctacgagggtgaggagcgacgctaccccggcggtcaggaggac
cgcttcgagatgccgtcccaggatgttcgaggtgcccgtggtgaggacgcctacacccac
ctcgacgaggacggcctcgtcaaccccgagacgaaagtcgacgagagctccgtgctgctg
ggcaagacctccccgccccgtttcctcgaggagcaggacgacatgggcggtctctcgccc
cagaagcgccgcgagacgtcggtcacgatgcgctcgggcgaggacggtgtcgtcgacacg
gtcacgctgatggagggcgaggacggctcgaaactttcgaaggtctcggtacgggacgag
cgaatccccgaactcggggacaagttcgcgtcccggcacggccagaaaggtgtcgtgggc
cacctcgcaccccaggaggacatgccgttcacggaggaaggcctcgtgcccgacctcgtg
ctcaacccccacgcgctcccgtcgcggatgaccgtgggccacgtactggagatgctcggc
ggcaaggtcggcgcactcgagggccggcgtgtcgacgggacggcgttccagggcgagagc
gaggaggaactccgcagcagtctggaggagcgcggcttcaaatcctccggcaaggaggtc
atgtactccggcgttaccggcgagaagatcgatgcggagatcttcgtcgggacgattttc
taccacaagctctaccacatggtgagcaacaaactgcacgcccgctcgcgcgggcccgtg
caggtactcacccgtcagcccaccgaggggcgtgcccgcgagggtggcctccgtgtgggt
gagatggagcgtgaggtactcatcggccacggcgccgcgttggcgctcaaggaacgactg
ctcgactcttcggaccgcgaatcggtgtacatctcggaggacaccgggatggtcgccgtc
gaggacgtggagcagcgccgggtgtacgaccccgtgactaagaacgaggacaacatccac
gagctggatgtcagctacgcgttcaagctgctgctggacgagatgaaggcgctcggcatc
cgacccaagctcgaactggaggacgcagtataa
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